| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0078 |
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| Symbol | |
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| ID | 6782896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 93585 |
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| End bp | 94586 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642766040 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_002136905 |
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| Protein GI | 197116478 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000682412 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATAAAC CAGTAATAGC CGTCACCATG GGGGATCCCT GCGGCATAGG GCCGGAGATC
ATCGCGGCGG CGCTCGCCGA CCCGGCCATC ACGGCGCTTT GTCGTCCGCT GGTCCTCGGG
GACCGGGGCG CCATGGAGCG CGGCATAGCG GTGGCTGGGG TCAAGCTCGC CATAGCGTCC
GCGCCCGACC TGCTACCCCC CCTCGACGCG TCCCCCCATA CCCTTTACCT GCGCGAGCTG
TCACGGCTGA AGCTCGACGA GATCCCTTAC GGCGCCCCGA CCAAGGCCGG AGGGGACGCC
TGCTACCGCT ACATCTGCGA AGCGGCCAAG CTCTGCCTGG ACGGGACGGT GCAGGCCATG
GCCACCGCCC CCATCAATAA GGAATCGATG AACAGCGCCG GGCACGACTA CCCGGGCCAC
ACGGAGCTTC TAGCGGAATT GACCGGGACC CCGGAGGTGG TGATGATGCT CGCCGGCGAG
CGCCTGCGGG TGACGCTCGT GACCATCCAC GAGCCGCTTG CCAGGGTGCC GGAACTGGTC
ACCTTCGACC GCGTTCTCTC CACCATCAGG ATCACTCACG ACGCCCTCAG CCGCTGGTTC
TGCTGTGCGC CGCGCCTGGC CGTCCTCGCC CTCAACCCGC ACTGCGGCGA GGGGGGGATG
TTCGGCGACG AGGAGTCCCG GATCATCGCG CCTGCGGTCG CTGCCGCGAG GGAAGCAGGT
ATTGACGCTG CAGGCCCCGT TTCCGCAGAC ACCCTGTTCC ACTTCGCCGC CAAAGGTGGG
TACGACGCGG TGGTCTGCAT GTACCACGAC CAGGGGTTGA TCCCCTTGAA GCTTTTGCAT
TTCGACGACG GGGTCAACGT GACCCTGGGG CTTCCCATCA TCCGCACCTC GGTCGATCAC
GGCACCGCCT ACAACCTGGC GGGGACGGGG AAAGCGAGCG CGGAAAGCAT GAAAGCCGCG
CTGGTCATGG CGGCACGCAT GGCACAGCAG GGTTGCCAAT AG
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| Protein sequence | MDKPVIAVTM GDPCGIGPEI IAAALADPAI TALCRPLVLG DRGAMERGIA VAGVKLAIAS
APDLLPPLDA SPHTLYLREL SRLKLDEIPY GAPTKAGGDA CYRYICEAAK LCLDGTVQAM
ATAPINKESM NSAGHDYPGH TELLAELTGT PEVVMMLAGE RLRVTLVTIH EPLARVPELV
TFDRVLSTIR ITHDALSRWF CCAPRLAVLA LNPHCGEGGM FGDEESRIIA PAVAAAREAG
IDAAGPVSAD TLFHFAAKGG YDAVVCMYHD QGLIPLKLLH FDDGVNVTLG LPIIRTSVDH
GTAYNLAGTG KASAESMKAA LVMAARMAQQ GCQ
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