| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0052 |
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| Symbol | |
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| ID | 6782870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 60472 |
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| End bp | 63636 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642766014 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002136879 |
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| Protein GI | 197116452 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGCTG TTCCCCGTAA AATCAGCGCG GCTTTGATCT TCCTGCTGGT GTTGTTTGGG
CTGCTTTTTA TCGGCGACTC GCAGCTGCAG GCGGCTTCCA GGCCGCACGT CCTGGTGCTC
AATTCCTACA ATGACGGTTA TGAATGGTCC GACGACGAGA TGCGCGGGTT GCGGGAGACC
CTGACCCGCA GGCTCCCCCA AATGGAGTTC TTGATCGAGC ACCTCGACAC CAAGAAATTC
CCCGCCAAAA AGCACTTCCC CCAGCTGGCC GACCTCCTTG CGGCGAAATA CAGCGCCAGC
CGTTTCCAGG TGGTGATCGC GATGGACAAC GCGGCTTTCG AGTTCGCCCT GCGCTACCGT
GACCGCCTCT TCCCGGGGAC GCCGCTGGTT TTTTGCGGCA TCAACGACTA CAACCCGCGG
ATGATAGCGG GTCGCAAGAA CCTGACTGGC GTCGCCGAAC ACCATGACAT GGTCGGCACG
CTGGAGACGG CGCTCTCCCT GCATCCCGGA ACCCGGCAGG TGATGGTGGT CCACGACTAT
ACCGACACCG GGCTCGCCAT GGCGCATGAA CTTTCCCAAC ACCATGTGCA GTTCCCGGGG
GTCCGTCTAC GCTTCCTCCC GAACCTCCCG CTCGAGATCG CGGTGCAGCA GTTGAAAGCG
CTGCGTCCGG ACACCCTTGT GCTGCTCCTT TCCTACTCGG TGGAGAAAGG GGGACGCTCC
TTCACCCAAG GCCAGGTAGC CCAAATGGTG TCATCCGCAA GCCCCGTCCC CGTTTATGCC
GTGCACGCCG CCCAGCTGGG AAAAGGCGTG GTCGGCGGGC GCATGATGGA GGGGGAGACC
CAGGGGAGAA AAGCTGCGGA ACTGGCGCTC AGGATCATCG CCGGCGAGAA GGCGCAGAGT
ATCGCCGTCG TAGACCAGAA CCTCTCCGAG GCCATGTTCG ACGATGCGGT GATGCGCAGG
TTCGGCATAG ACCGGGGGAA GATTCCCGCC GGGTCCCGGG CCATCAACAA GCCGGTCGCG
GTGTATGCGG TGAACAAGAC CGTCTTCTGG CTGGCGCTGG CCGTAGCGGT ACTGATGCTG
ACGGGCCTTT TGACCCTCTA CCTGAATAAC GAACGGCGCA AGCGGCTGGA AAAAGTGCTG
CAGATGTCCG AGGCGAGGTT CCGGCAGCTT TTCGACAACA CCGTCGACGC CATCTATATC
CACGACTTCG GCTTCAAGAT ACTGGAGGCG AACCAGTCGG CCTGCGACAA AATGGGGTAC
AGCCACGAAG AGCTGCTGCA CGTAAGCCTT TATGAGATCA ATCACCCAAG CCAGAGGGAG
AAACTGCCGA AACGGCTTGC CGCTGCGCAA AGGGACGGGC GGGCCCTGTA CGAATCGATG
CACCAGACCA GGGCGGGGGA GCCGGTCCCG ATCGAGGTCT CCAGCCGGGT GATCGAATTC
GGCGAGCAAC CGGCCATCTT GAGCGTGGTG CGTGACATCT CCCGGCGCAA GCGCATCGAG
CGGCGGGAGA ACGCGCGGCT GAAAATACTG GAGCAGATGG CCACAGGCTC CAACCTCGAA
GAGCTTTTGG GGGACATAGT CCGCTTCGTG GAGCAGGAAA GTCCCGGCGC GCTCTGCTCC
GTGCTACTCG TGGACGACTC GGGCACCCAC CTGGTCCATG GCGCCGCGCC GGGCCTTCCC
GACTTCTACA ACCAGGCCGT GAACGGCCTC AGGATCGAAC AGGGCATGGG CTCTTGCGGC
ACCGCCGCCT TCACCAAACA GCGCGTGGTG GTCGAGGACA TCGAGACCCA TCCTTACTGG
ACGAATTTCA GGCTGGCGCT GGACGCCGGC CTGCGCGCCT GCTGGTCCGA GCCGGTCCTC
TCTCGCGAGG CGGAGGTTTT AGGGACCTTC GCCGTCTATT ACCGGAGCTG CCGCAGCCCC
AGGGAGGAGG AACTTGCCCT GATCGAATCG GCGGCCCACA TGGCAAGCAT CGCCATCGGC
AAGATGCGCA GCGAGGAGAG CCGCCAAAAG CTAGAGGAGC AGATGCGCCA GATGCAGAAG
ATCGAGGCGA TCGGGCAGCT GGCGGGGGGG CTTGCGCACG ACTTCAACAA CCTGCTCACG
CCCATCTTCG TCTATGCCGA CATCGCCAAG CGGAGCTTTG CCCACGACGA CCCCAACTGG
AAGAAGCTCG ACGGCATCCT CGTCTCGGCC CACAAGGCGG CGGACCTCAC CAAGAAGCTC
CTCTCCTTCG GGCGCAAGCA GATGCTTACC ATGGAAGTGC TGGAGCTGAA CGAGGTGATC
GCGTCGCTTC TGGACCTGAT GCAGCGTACC ATCAGGGCGA ACATCGAGAT CAGGACCAAC
CTGACAGATT GCGGCGCCCG GATCTTCGCC GACCGTGGGC AGATCGAGCA GATCCTGATC
AATTTCGCCG TCAACGCCCA GGACGCAATC AACGGCAACG GCAGCATCGT GATAGAGACC
GGTAACGTGA CCATAGACGA CGAGTTCTCC CGCATGAACC CCGGCATCAA GCCCGGCCCG
CACGTGCTGC TCTCTTTCAC CGACAATGGC TGCGGCATGG GCGAAGAGGT GCTGAGCCAC
ATCTTCGAGC CCTTCTACAC CACGAAACCT GTAGGGCAGG GAACGGGGCT AGGCCTTGCG
ACGGTGTACG GGATCGTGAA GCAGCATAAC GGTTGGATCA AGGTGGAGAG CCAGGTAGGC
AATGGCACGA GCTTCCTCCT TTATTTCCCG AGGCAGGCGG CAAAGGCGAA AATGAAGCAG
GCGGAGCCTG AGAGCGCGGC AAAAATCGAG CAAAGCGACA GCCGGGCCAC CATCCTGGTC
GTCGACGACA ACGAGAGCAT CAGGGAGATG GCCCTGGAGC TCCTCCAGGC CTCGGGGCAC
CATGTCCTGA CCGCGGAAAC GCCGGCCCTC GCGCTGGAAC TGGTAGGGGA GCGCGCCGTC
TCCCTGGACC TGCTGGTGAC CGACGTGGTG ATGCCGGAGA TGAGCGGACC CGAGCTGTAC
GAGCGCCTGG CACTCCTTCA GCCGGGGCTC CCGGTACTCT ACATCTCCGG CTATACCTTC
GATGTGAAGG TGCATAACCC CAGGCAGCAT CAGCAGGTGA GTTTCCTTCC CAAGCCTTTC
ACCTCGGAGA AGTTCCTGTC TGTCATAGAC AAGGCTATTT CCTGA
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| Protein sequence | MLAVPRKISA ALIFLLVLFG LLFIGDSQLQ AASRPHVLVL NSYNDGYEWS DDEMRGLRET
LTRRLPQMEF LIEHLDTKKF PAKKHFPQLA DLLAAKYSAS RFQVVIAMDN AAFEFALRYR
DRLFPGTPLV FCGINDYNPR MIAGRKNLTG VAEHHDMVGT LETALSLHPG TRQVMVVHDY
TDTGLAMAHE LSQHHVQFPG VRLRFLPNLP LEIAVQQLKA LRPDTLVLLL SYSVEKGGRS
FTQGQVAQMV SSASPVPVYA VHAAQLGKGV VGGRMMEGET QGRKAAELAL RIIAGEKAQS
IAVVDQNLSE AMFDDAVMRR FGIDRGKIPA GSRAINKPVA VYAVNKTVFW LALAVAVLML
TGLLTLYLNN ERRKRLEKVL QMSEARFRQL FDNTVDAIYI HDFGFKILEA NQSACDKMGY
SHEELLHVSL YEINHPSQRE KLPKRLAAAQ RDGRALYESM HQTRAGEPVP IEVSSRVIEF
GEQPAILSVV RDISRRKRIE RRENARLKIL EQMATGSNLE ELLGDIVRFV EQESPGALCS
VLLVDDSGTH LVHGAAPGLP DFYNQAVNGL RIEQGMGSCG TAAFTKQRVV VEDIETHPYW
TNFRLALDAG LRACWSEPVL SREAEVLGTF AVYYRSCRSP REEELALIES AAHMASIAIG
KMRSEESRQK LEEQMRQMQK IEAIGQLAGG LAHDFNNLLT PIFVYADIAK RSFAHDDPNW
KKLDGILVSA HKAADLTKKL LSFGRKQMLT MEVLELNEVI ASLLDLMQRT IRANIEIRTN
LTDCGARIFA DRGQIEQILI NFAVNAQDAI NGNGSIVIET GNVTIDDEFS RMNPGIKPGP
HVLLSFTDNG CGMGEEVLSH IFEPFYTTKP VGQGTGLGLA TVYGIVKQHN GWIKVESQVG
NGTSFLLYFP RQAAKAKMKQ AEPESAAKIE QSDSRATILV VDDNESIREM ALELLQASGH
HVLTAETPAL ALELVGERAV SLDLLVTDVV MPEMSGPELY ERLALLQPGL PVLYISGYTF
DVKVHNPRQH QQVSFLPKPF TSEKFLSVID KAIS
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