| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0047 |
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| Symbol | |
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| ID | 6782865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 56446 |
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| End bp | 57222 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642766009 |
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| Product | UbiA prenyltransferase |
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| Protein accession | YP_002136874 |
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| Protein GI | 197116447 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGGG CCGCTGCGGC GGCGGGTTAC CTGCTCTTCC CCTCTCCGGC CCAGCGCCCT
ACCCTCTTGG CCGTCTTCCT GGGTGTGGCG CTTTTGGCCG CGGCAGGCTC CGCGCTGAAC
CAGGTCATGG AGCGGGACCT CGATGCGCTT ATGCGGCGCA CCTGCGACCG CCCTCTTCCC
ACCGGAAAAC TCACACCGGC CGCCGCCCTC CTGGCGGGAC TCGCTGCGCT TTCGGCAGGC
GCCGCCCTTC TTTCCCTCGT GGCCGGTACG GTTCCGGCCG CCGTCTCTCT TTTCACCCTC
CTCTGGTACC TGGCGCTGTA CACCCCCCTG AAGCGGGTCA GTTCGCTGGC GCTTCTGGTC
GGAGGGTTGT GCGGGTGCGG CGCGCCGCTG GTCGGGTGGA GCGCCGCCGG CGGGGGAATC
GGGGAGTTTC CGGTCATCCT GCTGGCCGGG GTCATTTACC TCTGGCAGGT GCCGCATTTC
TGGCAGTTGC AGCGAAAACA TGCCGACGAC TATCGGCGCG CAGGTTTCCC CGTCTTCACG
CCTCCCGCCG GCGCCGACGG TTGCGCGCCG CTTTGCCGGC TCTGGATGGC GGCCATGGTC
GCCGGGACCT TGATGCTTCC GCTCTTCGGC GTCGTCCGGG CCACGCCCCT TATCTGCACC
ATACTGCTGC CGGTACCCCT CCTGTTCTGG TCCAGGAAGC GTTGGGAACC CTTCGCCGGT
TTGGTGCTTC ATTGCTACCC GCTACTGGTC ACCCTTGCTA TATTCGGTGC TAAATGA
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| Protein sequence | MNGAAAAAGY LLFPSPAQRP TLLAVFLGVA LLAAAGSALN QVMERDLDAL MRRTCDRPLP
TGKLTPAAAL LAGLAALSAG AALLSLVAGT VPAAVSLFTL LWYLALYTPL KRVSSLALLV
GGLCGCGAPL VGWSAAGGGI GEFPVILLAG VIYLWQVPHF WQLQRKHADD YRRAGFPVFT
PPAGADGCAP LCRLWMAAMV AGTLMLPLFG VVRATPLICT ILLPVPLLFW SRKRWEPFAG
LVLHCYPLLV TLAIFGAK
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