| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0016 |
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| Symbol | hemE |
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| ID | 6782834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 22877 |
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| End bp | 23896 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642765978 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_002136843 |
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| Protein GI | 197116416 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family
[TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.267289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTC GATTTTTAGA CGCATGTTGG GGGAAGCCGG TTGATACGGT GCCGGTCTGG
CTTATGCGCC AGGCGGGACG TTATCTCCCC GATTACATGC GCGTTCGCTC CAAATGCACC
TTCCTGGAAC TGTGCAAGAC CCCGGAACTG GCGACCGAGG TAACTGTTCA GCCGGTCGAC
ATCCTCGGCG TCGACGCCGC GATCCTCTTC TCCGACATCC TCACCCCGAT CGAGCCGATG
GGGATGGAGC TCGACTTCAC CCCCGGCCCC GTCTTCGCCA AGCCGATCCG TACCATGGCC
GACGTCGAGG CACTCAAGAT CCCGAAGATG GAGACCGACG TCCCCTACGT GCTGGACGCA
GTCAAGCTGC TCCGCAAGGA GCTCGCCACC AAGGTGCCGC TGATCGGCTT CGGCGGCGCG
CCGTTCACCC TGGCCTGCTA CATGGTCGAG GGTAAGGGTT CCAAGGACTT CGCCGCCCTC
AAGAAGATGA TGTACGCCGA CCCCGAAGTG TACGCGGCGC TGATGGATAA GATCACCACC
ATGGACATGG AGTACCTGAA CGCGCAGATC AAGGCGGGCG CTCAGGCGAT CCAGATCTTC
GACACCTGGG GCGGCATGCT CTCCCCGGCC GACTACGAGC GCTACGTCCT CCCCTACACC
CAGCGCCTGA TCAACGGCCT CGACCGCACC AACATCCCGG TGATCCACTT CGTCAAGGGC
GCAGGGACCA TGCTGGAGAT CGTGAAGCAG GCCGGCGGCG ACGTCATGGG CCTCGACTGG
CACGTGAACC TCGGCAAGGC CCGCGATATC CTGGGCGACA TGGCGGTGCA GGGGAACCTG
GACCCGACCG TGCTCTTCGC TCCCAACGAG ATCATCGAGC GCGAGGTGAA GAGGGTGCTG
GACGAAAACG CAGGCCGGCC CGGTCTCATC TTCAACCTGG GACACGGCAT CCTCCCGACC
GTCCCGCCGG AAAAAGCGAT CTTCATGGTC GACTGCGTGC ACCGGCTGTC GAGGAAATAG
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| Protein sequence | MNTRFLDACW GKPVDTVPVW LMRQAGRYLP DYMRVRSKCT FLELCKTPEL ATEVTVQPVD
ILGVDAAILF SDILTPIEPM GMELDFTPGP VFAKPIRTMA DVEALKIPKM ETDVPYVLDA
VKLLRKELAT KVPLIGFGGA PFTLACYMVE GKGSKDFAAL KKMMYADPEV YAALMDKITT
MDMEYLNAQI KAGAQAIQIF DTWGGMLSPA DYERYVLPYT QRLINGLDRT NIPVIHFVKG
AGTMLEIVKQ AGGDVMGLDW HVNLGKARDI LGDMAVQGNL DPTVLFAPNE IIEREVKRVL
DENAGRPGLI FNLGHGILPT VPPEKAIFMV DCVHRLSRK
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