Gene Gbem_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0012 
Symbol 
ID6782830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp17567 
End bp19714 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content62% 
IMG OID642765974 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_002136839 
Protein GI197116412 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.99155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAAG AGCTGAGGGT CCTTTTGGTC GAGGACTCGG AAGAAGACAG CCTGCTTCTG 
ATCAGGGAGC TGCGCCGCGG CGGCTACAAA CTGATACACA TGCGAGTGGA GACTGCGGAG
AGCATGCGCC GGGCCCTGCA TGACGGGGAG TGGGACGTGG TGATCTCCGA CTACCGCATG
CCCTCTTTCG ACGCCCTCGG GGCCCTGCAG GTGCTGCACG AGACCGGGCG CGACATCCCA
TTCATCATCG TCTCAGGCAA GATCGGCGAG GACCTAGCCG TCGAGGCCAT GAAATCGGGT
GCCAGCGACT ACCTAATGAA AGGGAACCTG GCCCGCCTGG TACCGGTTAT GGTGCGGGAA
CTGAGGGAGG CTGAGGAGCG CAGGACGCAC CGGCTCACCC AGGATGCGGT GCGCCGCGGC
AAGGCGGAGT GGGAAAGCGT CTTCGACGCG GTCTCGGACC TGATCATCAT CACCGACGCC
GACGGCGTCG TGTTGCGCTG CAACGGCCGG GTGAGCGCCT ACTTTCCCGG CGGGTACGGC
GCCATCATCG GCCGCAGGAT CGACGAGATA TTTTTCGGAT CGCAGCAACC CGAGGGAAAG
CTGTTCCGCT TCCTGCACAG CGTCCAGAGC GAGGCCGACG AGGACATCCG CTTCCCCAAC
CTGAGCGGCT GGTACAACGT CGCCAGCTAC CCCATGCGCA CCGAGGGGAG CAACCGCCCG
AACCTGGTCT TCATCATCAA GGACATCACC AAAAGGCGCG AGGTCGAGGA GGAGAAACGG
ACCAGCGACC GCGAACTCCT CACCCTGTAC GCGGTCGCCT TCCGCCTGCA GTACACGAAG
GGGGTCGACA AGGTGATGGG GGACCTCCTC TTCCAGCTGC ACAACATGCT GCAGATGGAT
TTCTCCTGCA TCCACCTTTT CGAGGACGAC AAACTCAAGA TGCGCGCCTC GCTGGGTGTT
TCCCCCGCGT TCGAGAAGGC GATGAAGACG CTCCCCCGGG AGACCCAGTG GGCGACCCTG
GCGCAGGCGG GGCGCCCTTT TCTGGGAGAG GAGCCAGACG CAAGGTTTCC GGCCAGAGCC
AAAAGCGCCG CCATAGAGAT GGGGCTGCAC TCCTGGTGCA CAGTGCCGCT CAAGATAGGA
CAGGAGGTGA TGGGGGTGAT GACGGTGGGG ACCGTCTCCG GGCGCAGCTA CAGCGACCGC
GACGTCTTCC TGCTCTGTGC CATTGCAGGT CAGCTCGCGG TCCTCATCGA CAACTACGGC
CTCTACGACA AGATGAAGGA GAAGGCGGAG GAACTCTACC GCAGCAAAGA AGAGCTCAAA
GAGAACCTGC ACAAGGTGAA GCGCGCCAAC ATCGAGCTGG GGCGCCTCAA CACGGCGAAG
AACAACTTCA TCGGCATCGC CTCGCACGAG TTGAAGACCC CGATCACCTC GATCATGGGG
GGGGTCGAGT TCCTGCTGAA ATATTCCGGC ATCCAGATGA GCCCCGAGCA GCACAACATC
TTCGTCTCGG TGTACGAAGG GACCATTCAG CTCAGGAAAC TGGTGGAGGA CCTCCTCTCC
ATCTCCCGCA TCGAGGCGCA AGGGCCGCTG GCCCAGAAAA AGCCGGCGAG CCTGATGCGG
GTCTGCCGCG AAGTGCACGA CCTCTTCGCG CTGCCGCTAT CCGAGCGGCA CATAAAGGTG
GAGATCACGG GGGACGACGT CCTCGTGCCG GTGGACGAGG CCTTCGCCAT GCTCGCGGTG
CGCAACCTTT TAGAGAACGC CATCAAGTTC ACCCGCGACG GAGGGTGCGT CCGATTAACC
GGACGGGTGC TGAAGCAGGC GCAGCTCAAG GAGATGACGC AGACGCTGCA TACCTTCTAT
CCCTCCTTCC CCGGTAACGT CGCGGCGACC GAAAAATACT ATCTGCTCCA GGTGCGCGAC
AACGGAATCG GCATCCCGCC GGACGAGAGA GTCCGCGTCT TCGAAAAGTT CTACGGCGTC
GGGGATATCG ACCACCACAG CTCGGGAGCC ACCGCCTTCA TGTCCAAGGG CTCGGGGCTC
GGACTCTCCA TCGTGCGCGG CATCATGGAC GCCCATGAAG GGGCGGTCTG GGTCGAAGAG
GCCGAGGGGG GAGGAAGCAC CTTCTCGCTC CTTTTCCCCA TCGAATAA
 
Protein sequence
MSKELRVLLV EDSEEDSLLL IRELRRGGYK LIHMRVETAE SMRRALHDGE WDVVISDYRM 
PSFDALGALQ VLHETGRDIP FIIVSGKIGE DLAVEAMKSG ASDYLMKGNL ARLVPVMVRE
LREAEERRTH RLTQDAVRRG KAEWESVFDA VSDLIIITDA DGVVLRCNGR VSAYFPGGYG
AIIGRRIDEI FFGSQQPEGK LFRFLHSVQS EADEDIRFPN LSGWYNVASY PMRTEGSNRP
NLVFIIKDIT KRREVEEEKR TSDRELLTLY AVAFRLQYTK GVDKVMGDLL FQLHNMLQMD
FSCIHLFEDD KLKMRASLGV SPAFEKAMKT LPRETQWATL AQAGRPFLGE EPDARFPARA
KSAAIEMGLH SWCTVPLKIG QEVMGVMTVG TVSGRSYSDR DVFLLCAIAG QLAVLIDNYG
LYDKMKEKAE ELYRSKEELK ENLHKVKRAN IELGRLNTAK NNFIGIASHE LKTPITSIMG
GVEFLLKYSG IQMSPEQHNI FVSVYEGTIQ LRKLVEDLLS ISRIEAQGPL AQKKPASLMR
VCREVHDLFA LPLSERHIKV EITGDDVLVP VDEAFAMLAV RNLLENAIKF TRDGGCVRLT
GRVLKQAQLK EMTQTLHTFY PSFPGNVAAT EKYYLLQVRD NGIGIPPDER VRVFEKFYGV
GDIDHHSSGA TAFMSKGSGL GLSIVRGIMD AHEGAVWVEE AEGGGSTFSL LFPIE