| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0012 |
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| Symbol | |
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| ID | 6782830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 17567 |
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| End bp | 19714 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642765974 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002136839 |
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| Protein GI | 197116412 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.99155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAAAG AGCTGAGGGT CCTTTTGGTC GAGGACTCGG AAGAAGACAG CCTGCTTCTG
ATCAGGGAGC TGCGCCGCGG CGGCTACAAA CTGATACACA TGCGAGTGGA GACTGCGGAG
AGCATGCGCC GGGCCCTGCA TGACGGGGAG TGGGACGTGG TGATCTCCGA CTACCGCATG
CCCTCTTTCG ACGCCCTCGG GGCCCTGCAG GTGCTGCACG AGACCGGGCG CGACATCCCA
TTCATCATCG TCTCAGGCAA GATCGGCGAG GACCTAGCCG TCGAGGCCAT GAAATCGGGT
GCCAGCGACT ACCTAATGAA AGGGAACCTG GCCCGCCTGG TACCGGTTAT GGTGCGGGAA
CTGAGGGAGG CTGAGGAGCG CAGGACGCAC CGGCTCACCC AGGATGCGGT GCGCCGCGGC
AAGGCGGAGT GGGAAAGCGT CTTCGACGCG GTCTCGGACC TGATCATCAT CACCGACGCC
GACGGCGTCG TGTTGCGCTG CAACGGCCGG GTGAGCGCCT ACTTTCCCGG CGGGTACGGC
GCCATCATCG GCCGCAGGAT CGACGAGATA TTTTTCGGAT CGCAGCAACC CGAGGGAAAG
CTGTTCCGCT TCCTGCACAG CGTCCAGAGC GAGGCCGACG AGGACATCCG CTTCCCCAAC
CTGAGCGGCT GGTACAACGT CGCCAGCTAC CCCATGCGCA CCGAGGGGAG CAACCGCCCG
AACCTGGTCT TCATCATCAA GGACATCACC AAAAGGCGCG AGGTCGAGGA GGAGAAACGG
ACCAGCGACC GCGAACTCCT CACCCTGTAC GCGGTCGCCT TCCGCCTGCA GTACACGAAG
GGGGTCGACA AGGTGATGGG GGACCTCCTC TTCCAGCTGC ACAACATGCT GCAGATGGAT
TTCTCCTGCA TCCACCTTTT CGAGGACGAC AAACTCAAGA TGCGCGCCTC GCTGGGTGTT
TCCCCCGCGT TCGAGAAGGC GATGAAGACG CTCCCCCGGG AGACCCAGTG GGCGACCCTG
GCGCAGGCGG GGCGCCCTTT TCTGGGAGAG GAGCCAGACG CAAGGTTTCC GGCCAGAGCC
AAAAGCGCCG CCATAGAGAT GGGGCTGCAC TCCTGGTGCA CAGTGCCGCT CAAGATAGGA
CAGGAGGTGA TGGGGGTGAT GACGGTGGGG ACCGTCTCCG GGCGCAGCTA CAGCGACCGC
GACGTCTTCC TGCTCTGTGC CATTGCAGGT CAGCTCGCGG TCCTCATCGA CAACTACGGC
CTCTACGACA AGATGAAGGA GAAGGCGGAG GAACTCTACC GCAGCAAAGA AGAGCTCAAA
GAGAACCTGC ACAAGGTGAA GCGCGCCAAC ATCGAGCTGG GGCGCCTCAA CACGGCGAAG
AACAACTTCA TCGGCATCGC CTCGCACGAG TTGAAGACCC CGATCACCTC GATCATGGGG
GGGGTCGAGT TCCTGCTGAA ATATTCCGGC ATCCAGATGA GCCCCGAGCA GCACAACATC
TTCGTCTCGG TGTACGAAGG GACCATTCAG CTCAGGAAAC TGGTGGAGGA CCTCCTCTCC
ATCTCCCGCA TCGAGGCGCA AGGGCCGCTG GCCCAGAAAA AGCCGGCGAG CCTGATGCGG
GTCTGCCGCG AAGTGCACGA CCTCTTCGCG CTGCCGCTAT CCGAGCGGCA CATAAAGGTG
GAGATCACGG GGGACGACGT CCTCGTGCCG GTGGACGAGG CCTTCGCCAT GCTCGCGGTG
CGCAACCTTT TAGAGAACGC CATCAAGTTC ACCCGCGACG GAGGGTGCGT CCGATTAACC
GGACGGGTGC TGAAGCAGGC GCAGCTCAAG GAGATGACGC AGACGCTGCA TACCTTCTAT
CCCTCCTTCC CCGGTAACGT CGCGGCGACC GAAAAATACT ATCTGCTCCA GGTGCGCGAC
AACGGAATCG GCATCCCGCC GGACGAGAGA GTCCGCGTCT TCGAAAAGTT CTACGGCGTC
GGGGATATCG ACCACCACAG CTCGGGAGCC ACCGCCTTCA TGTCCAAGGG CTCGGGGCTC
GGACTCTCCA TCGTGCGCGG CATCATGGAC GCCCATGAAG GGGCGGTCTG GGTCGAAGAG
GCCGAGGGGG GAGGAAGCAC CTTCTCGCTC CTTTTCCCCA TCGAATAA
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| Protein sequence | MSKELRVLLV EDSEEDSLLL IRELRRGGYK LIHMRVETAE SMRRALHDGE WDVVISDYRM
PSFDALGALQ VLHETGRDIP FIIVSGKIGE DLAVEAMKSG ASDYLMKGNL ARLVPVMVRE
LREAEERRTH RLTQDAVRRG KAEWESVFDA VSDLIIITDA DGVVLRCNGR VSAYFPGGYG
AIIGRRIDEI FFGSQQPEGK LFRFLHSVQS EADEDIRFPN LSGWYNVASY PMRTEGSNRP
NLVFIIKDIT KRREVEEEKR TSDRELLTLY AVAFRLQYTK GVDKVMGDLL FQLHNMLQMD
FSCIHLFEDD KLKMRASLGV SPAFEKAMKT LPRETQWATL AQAGRPFLGE EPDARFPARA
KSAAIEMGLH SWCTVPLKIG QEVMGVMTVG TVSGRSYSDR DVFLLCAIAG QLAVLIDNYG
LYDKMKEKAE ELYRSKEELK ENLHKVKRAN IELGRLNTAK NNFIGIASHE LKTPITSIMG
GVEFLLKYSG IQMSPEQHNI FVSVYEGTIQ LRKLVEDLLS ISRIEAQGPL AQKKPASLMR
VCREVHDLFA LPLSERHIKV EITGDDVLVP VDEAFAMLAV RNLLENAIKF TRDGGCVRLT
GRVLKQAQLK EMTQTLHTFY PSFPGNVAAT EKYYLLQVRD NGIGIPPDER VRVFEKFYGV
GDIDHHSSGA TAFMSKGSGL GLSIVRGIMD AHEGAVWVEE AEGGGSTFSL LFPIE
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