Gene Gbem_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0005 
Symbol 
ID6782824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp6866 
End bp9376 
Gene Length2511 bp 
Protein Length836 aa 
Translation table11 
GC content61% 
IMG OID642765969 
ProductDNA gyrase, A subunit 
Protein accessionYP_002136834 
Protein GI197116407 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAATC AACTCAACAA GGTATCGGTA AACATCGAAG ACGAGATGAA ACGCTCCTAC 
ATGGACTACG CCATGTCCGT GATCGTGGGG CGCGCTCTTC CGGACGTGCG CGACGGACTG
AAGCCGGTAC ACAGGCGCTG CCTGTTCGCC ATGTACGACA TGAGCAACGA CTGGAACAAG
CCGTACAAGA AATCGGCCCG CGTGGTCGGC GACGTCATCG GTAAGTACCA CCCGCACGGC
GACACCGCCG TGTACGACAC CCTGGTCAGG ATGGCCCAGG ACTTCTCGCT GCGCTACCCG
CTGGTCGACG GCCAGGGGAA CTTCGGCTCC ATCGACGGCG ACTCCCCTGC GGCTATGCGT
TACACCGAGA TCAGGATGGA GCAGCTGGCC CACGAGCTTT TGGCCGACAT CGACAAGGAA
ACGGTCCCCT ACGGCCCCAA CTACGACGAC TCGCTGAAAG AACCGCTGGT ACTCCCCTCC
AAGTTCCCGA ACCTCTTGGT GAACGGCTCC GCCGGCATCG CGGTCGGCAT GGCCACCAAC
ATCCCGCCGC ACAACCTCTC CGAAGTGATC GACGGCATCG TGGCCATCAT CGATAACCCG
CAGCTTACCT TCGAGGAGCT GGTGGAACTG ATCCCGGGTC CGGATTTTCC GACCGGCGGC
TTCATCTACG GCCGCGAAGG GATCATGAAG GCCTACTCGA CCGGCCGCGG CATCATCCAG
ATGCGCGCCA AGGTGCAGAT CGAGACCCAG AAAAAGACCG AGCGCCAGTC CATCGTGGTC
ACGGAAATCC CGTACCAGGT GAACAAGGCG AGGCTGGTCG AGAAGATAGC CGAGCTGGTC
AAGGAGAAGA AGATCGAGGG GATCTCGGAC TTAAGGGACG AGAGCGACCG CGAGGGTATG
CGCGTCGTCA TCGAACTGAA GAAGGACGAA AACCCGACCA TCATCCTGAA CCACCTCTAC
AAGCAGACCC AGATGCAGTC CTCCTTCGGC ATCATCATGC TGGCCATCGT CAACAGCCGG
CCGCGCGTTT TGACGCTCAG GGAGACCATC GACTTCTTCA TCGAGCACAG AAAGGAGATC
GTCACCCGCC GCACCATCTT CGACCTGAAG AAGGCAGAGG CGAGGGCCCA TATCCTGGAA
GGCTTGAAGA TAGCGCTGGA CAACCTGGAC GAGGTGATCG CGCTGATCAA GGCGAGCGCC
TCCCCGGCCG AGGCGAAGGC GGGGCTCATG GAGCGCTTCG GGCTCTCCGA CCTTCAGGCC
CAGGCGATCC TCGACATGAG GCTGCACCGC TTAACCGGCC TCGAGCGCGA GAAGATCATG
GAGGAACTGC GCGAGATTCT GAAGTACATC GCCAGGTTGA AAGAGATCCT CGCCTCCGAG
GCGGAGATCC TCAAGATCAT CGTCGGGGAA CTGGTCGAGC TCAAAGACAA GTTCGGCGAC
AAGCGCCGCT CCGAAATAGT GATGCAGACT GCGGACATCT CCTTGGAGGA CACCATCGTC
GAGGAAGACA TGGTGGTCAC CATCTCGCAC ACGGGCTACA TCAAGCGCAA CGCCGTCACC
CTCTACCGCG CCCAGCGCCG CGGCGGCAAG GGCAAGACCG GCATGAAGAC CAAGGAAGAG
GATTTCGTCG AGCAGCTTTT CATCGCCTCC ACCAAGGATT ATCTGATGTT CTTCACCGAT
GCCGGGAAGG TCTACTGGCT CAAGGTGTAC GAGATCCCGG AGGCGGGGCG CGCGGCGCGC
GGCAAGGCGA TCGTGAACCT CTTGAACCTG GCGGCGAACG AGAAGATCAC CACCATACTC
CCGGTCAAGG AGTTCGTGGA CGACAAGTTC ATCATGATGG CGACCAGAAA CGGCGTGGTG
AAGAAGACCA ACATGATGGA GTACTCGCAC CCGAGGGTAG GCGGCATCAT CGCCGTGAAC
CTCGACGAAG GGGACAAGCT GATCACCGTG GCGCTCACCG ACGGCAAGCA GGACGTGCTG
CTCGCCTCCG CCAACGGCAA GGCGATCCGC TTCAAGGAAG AGGACGTCCG CACCGTGGGA
CGCGTCTCGC GCGGGGTGCG CGGCATGACG CTGGAGGGCG AGGACGTGGT GATCGGCATG
GAGATCCTCA ACGAGAACTT CACCGACTCC ACCATCTTCA CCGTGACCGA GAACGGCTAT
GGCAAGCGGA CCGAGATCAG CGAGTACCGC AGCCAGTCGC GCGGCGGCAA GGGGGTCATC
ACCATCAAGA CCACCGAGAG AAACGGCAAC GTGGTCGACA TCAAGCAGGT CAACGACGAT
AACGACCTGA TGCTCATCAC GGACCAGGGA AAGATCCTGC GCGTTCCCGT CGCCGGCTTC
TCCATCATCG GGCGCAACAC CCAGGGGGTG CGCCTCATGG TGAAAGAGGA GAACGAGAGG
GTGGTCGCCG TGGCCCGGCT CGCCGAGAAA GAGGAGCAGG ACGAGTCGGA AGACGGCGAA
CTCGACGAGA TGGTGGAACT GGAATCGGGC GAGGAGCAGG GCGAAGAATA A
 
Protein sequence
MLNQLNKVSV NIEDEMKRSY MDYAMSVIVG RALPDVRDGL KPVHRRCLFA MYDMSNDWNK 
PYKKSARVVG DVIGKYHPHG DTAVYDTLVR MAQDFSLRYP LVDGQGNFGS IDGDSPAAMR
YTEIRMEQLA HELLADIDKE TVPYGPNYDD SLKEPLVLPS KFPNLLVNGS AGIAVGMATN
IPPHNLSEVI DGIVAIIDNP QLTFEELVEL IPGPDFPTGG FIYGREGIMK AYSTGRGIIQ
MRAKVQIETQ KKTERQSIVV TEIPYQVNKA RLVEKIAELV KEKKIEGISD LRDESDREGM
RVVIELKKDE NPTIILNHLY KQTQMQSSFG IIMLAIVNSR PRVLTLRETI DFFIEHRKEI
VTRRTIFDLK KAEARAHILE GLKIALDNLD EVIALIKASA SPAEAKAGLM ERFGLSDLQA
QAILDMRLHR LTGLEREKIM EELREILKYI ARLKEILASE AEILKIIVGE LVELKDKFGD
KRRSEIVMQT ADISLEDTIV EEDMVVTISH TGYIKRNAVT LYRAQRRGGK GKTGMKTKEE
DFVEQLFIAS TKDYLMFFTD AGKVYWLKVY EIPEAGRAAR GKAIVNLLNL AANEKITTIL
PVKEFVDDKF IMMATRNGVV KKTNMMEYSH PRVGGIIAVN LDEGDKLITV ALTDGKQDVL
LASANGKAIR FKEEDVRTVG RVSRGVRGMT LEGEDVVIGM EILNENFTDS TIFTVTENGY
GKRTEISEYR SQSRGGKGVI TIKTTERNGN VVDIKQVNDD NDLMLITDQG KILRVPVAGF
SIIGRNTQGV RLMVKEENER VVAVARLAEK EEQDESEDGE LDEMVELESG EEQGEE