Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0005 |
Symbol | |
ID | 6782824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 6866 |
End bp | 9376 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642765969 |
Product | DNA gyrase, A subunit |
Protein accession | YP_002136834 |
Protein GI | 197116407 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAATC AACTCAACAA GGTATCGGTA AACATCGAAG ACGAGATGAA ACGCTCCTAC ATGGACTACG CCATGTCCGT GATCGTGGGG CGCGCTCTTC CGGACGTGCG CGACGGACTG AAGCCGGTAC ACAGGCGCTG CCTGTTCGCC ATGTACGACA TGAGCAACGA CTGGAACAAG CCGTACAAGA AATCGGCCCG CGTGGTCGGC GACGTCATCG GTAAGTACCA CCCGCACGGC GACACCGCCG TGTACGACAC CCTGGTCAGG ATGGCCCAGG ACTTCTCGCT GCGCTACCCG CTGGTCGACG GCCAGGGGAA CTTCGGCTCC ATCGACGGCG ACTCCCCTGC GGCTATGCGT TACACCGAGA TCAGGATGGA GCAGCTGGCC CACGAGCTTT TGGCCGACAT CGACAAGGAA ACGGTCCCCT ACGGCCCCAA CTACGACGAC TCGCTGAAAG AACCGCTGGT ACTCCCCTCC AAGTTCCCGA ACCTCTTGGT GAACGGCTCC GCCGGCATCG CGGTCGGCAT GGCCACCAAC ATCCCGCCGC ACAACCTCTC CGAAGTGATC GACGGCATCG TGGCCATCAT CGATAACCCG CAGCTTACCT TCGAGGAGCT GGTGGAACTG ATCCCGGGTC CGGATTTTCC GACCGGCGGC TTCATCTACG GCCGCGAAGG GATCATGAAG GCCTACTCGA CCGGCCGCGG CATCATCCAG ATGCGCGCCA AGGTGCAGAT CGAGACCCAG AAAAAGACCG AGCGCCAGTC CATCGTGGTC ACGGAAATCC CGTACCAGGT GAACAAGGCG AGGCTGGTCG AGAAGATAGC CGAGCTGGTC AAGGAGAAGA AGATCGAGGG GATCTCGGAC TTAAGGGACG AGAGCGACCG CGAGGGTATG CGCGTCGTCA TCGAACTGAA GAAGGACGAA AACCCGACCA TCATCCTGAA CCACCTCTAC AAGCAGACCC AGATGCAGTC CTCCTTCGGC ATCATCATGC TGGCCATCGT CAACAGCCGG CCGCGCGTTT TGACGCTCAG GGAGACCATC GACTTCTTCA TCGAGCACAG AAAGGAGATC GTCACCCGCC GCACCATCTT CGACCTGAAG AAGGCAGAGG CGAGGGCCCA TATCCTGGAA GGCTTGAAGA TAGCGCTGGA CAACCTGGAC GAGGTGATCG CGCTGATCAA GGCGAGCGCC TCCCCGGCCG AGGCGAAGGC GGGGCTCATG GAGCGCTTCG GGCTCTCCGA CCTTCAGGCC CAGGCGATCC TCGACATGAG GCTGCACCGC TTAACCGGCC TCGAGCGCGA GAAGATCATG GAGGAACTGC GCGAGATTCT GAAGTACATC GCCAGGTTGA AAGAGATCCT CGCCTCCGAG GCGGAGATCC TCAAGATCAT CGTCGGGGAA CTGGTCGAGC TCAAAGACAA GTTCGGCGAC AAGCGCCGCT CCGAAATAGT GATGCAGACT GCGGACATCT CCTTGGAGGA CACCATCGTC GAGGAAGACA TGGTGGTCAC CATCTCGCAC ACGGGCTACA TCAAGCGCAA CGCCGTCACC CTCTACCGCG CCCAGCGCCG CGGCGGCAAG GGCAAGACCG GCATGAAGAC CAAGGAAGAG GATTTCGTCG AGCAGCTTTT CATCGCCTCC ACCAAGGATT ATCTGATGTT CTTCACCGAT GCCGGGAAGG TCTACTGGCT CAAGGTGTAC GAGATCCCGG AGGCGGGGCG CGCGGCGCGC GGCAAGGCGA TCGTGAACCT CTTGAACCTG GCGGCGAACG AGAAGATCAC CACCATACTC CCGGTCAAGG AGTTCGTGGA CGACAAGTTC ATCATGATGG CGACCAGAAA CGGCGTGGTG AAGAAGACCA ACATGATGGA GTACTCGCAC CCGAGGGTAG GCGGCATCAT CGCCGTGAAC CTCGACGAAG GGGACAAGCT GATCACCGTG GCGCTCACCG ACGGCAAGCA GGACGTGCTG CTCGCCTCCG CCAACGGCAA GGCGATCCGC TTCAAGGAAG AGGACGTCCG CACCGTGGGA CGCGTCTCGC GCGGGGTGCG CGGCATGACG CTGGAGGGCG AGGACGTGGT GATCGGCATG GAGATCCTCA ACGAGAACTT CACCGACTCC ACCATCTTCA CCGTGACCGA GAACGGCTAT GGCAAGCGGA CCGAGATCAG CGAGTACCGC AGCCAGTCGC GCGGCGGCAA GGGGGTCATC ACCATCAAGA CCACCGAGAG AAACGGCAAC GTGGTCGACA TCAAGCAGGT CAACGACGAT AACGACCTGA TGCTCATCAC GGACCAGGGA AAGATCCTGC GCGTTCCCGT CGCCGGCTTC TCCATCATCG GGCGCAACAC CCAGGGGGTG CGCCTCATGG TGAAAGAGGA GAACGAGAGG GTGGTCGCCG TGGCCCGGCT CGCCGAGAAA GAGGAGCAGG ACGAGTCGGA AGACGGCGAA CTCGACGAGA TGGTGGAACT GGAATCGGGC GAGGAGCAGG GCGAAGAATA A
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Protein sequence | MLNQLNKVSV NIEDEMKRSY MDYAMSVIVG RALPDVRDGL KPVHRRCLFA MYDMSNDWNK PYKKSARVVG DVIGKYHPHG DTAVYDTLVR MAQDFSLRYP LVDGQGNFGS IDGDSPAAMR YTEIRMEQLA HELLADIDKE TVPYGPNYDD SLKEPLVLPS KFPNLLVNGS AGIAVGMATN IPPHNLSEVI DGIVAIIDNP QLTFEELVEL IPGPDFPTGG FIYGREGIMK AYSTGRGIIQ MRAKVQIETQ KKTERQSIVV TEIPYQVNKA RLVEKIAELV KEKKIEGISD LRDESDREGM RVVIELKKDE NPTIILNHLY KQTQMQSSFG IIMLAIVNSR PRVLTLRETI DFFIEHRKEI VTRRTIFDLK KAEARAHILE GLKIALDNLD EVIALIKASA SPAEAKAGLM ERFGLSDLQA QAILDMRLHR LTGLEREKIM EELREILKYI ARLKEILASE AEILKIIVGE LVELKDKFGD KRRSEIVMQT ADISLEDTIV EEDMVVTISH TGYIKRNAVT LYRAQRRGGK GKTGMKTKEE DFVEQLFIAS TKDYLMFFTD AGKVYWLKVY EIPEAGRAAR GKAIVNLLNL AANEKITTIL PVKEFVDDKF IMMATRNGVV KKTNMMEYSH PRVGGIIAVN LDEGDKLITV ALTDGKQDVL LASANGKAIR FKEEDVRTVG RVSRGVRGMT LEGEDVVIGM EILNENFTDS TIFTVTENGY GKRTEISEYR SQSRGGKGVI TIKTTERNGN VVDIKQVNDD NDLMLITDQG KILRVPVAGF SIIGRNTQGV RLMVKEENER VVAVARLAEK EEQDESEDGE LDEMVELESG EEQGEE
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