Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0001 |
Symbol | dnaA |
ID | 6783799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 166 |
End bp | 1542 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642765965 |
Product | chromosomal replication initiation protein |
Protein accession | YP_002136830 |
Protein GI | 197116403 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000304436 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA TTTGGCTGGA AGCCCAGACA AATCTTAAGC AAGTATTAAC CGAACAGACA TACAGTACGT GGATCGACCC ATTGAAGTTT CTGGGCGCCA CCGTTGACAC CATAGTCCTC GAAGTCCCCA GTTCATTCTT TCAAAAGTGG GTTACTGACA AATATCTGGC CATGATCAAG GAAGCCATCT CCGCGGTCAA CGGCAAAAGC TACCAGATAG AGTTCCATGT CGCCGAAGAG AAGCCGGAGG CAGCTCACGA GGCAAAGCCC GAAAAAGAGG CCAAGCCTGC CAGGGAGAAA GAAAGGGATA AGGACAAGGA AAAAGAGAAG GATAGAGAAA AGGAAAAGAA GGAGCTGGTT CCCAATCTGA ACCCCAAGTA CACCTTCGAG TCTTTCGTCT CGGGTCCTAG CAACCAGTTC GCGTATGCAG CTTCCCAGGC GGTGGCGAAC AAGCCGGCTA CCAATTACAA CCCGCTTTTC ATCTACGGCG GTGTAGGTCT TGGAAAGACG CACCTGGTCA ACGCCATCGG CAACCATATC CTGGCCAAGA ACCCGAAGGC GAAGATCTGC TATTACTCCT CCGAAAAGTT CATGAACGAG ATGATCAACT CGCTCCGCTA CAAGAAGATG GACGAGTTCC GCAACAAGTT CCGGAAAATG GACCTGCTGC TCATCGACGA CATACAGTTC ATGGCCGGAA AAGAGGCCAC GCAGGAAGAG TTCTTCCACA CCTTCAATGC GCTCTACGAG TCGCACAAGC AGATCGTGGT CACCTCCGAT AAGTTCCCGA AGGACATCCC AGGGCTCGAG GAGCGGTTGA GAAGCCGTTT CGAATGGGGG CTGATCGCGG ACATCCAGCC ACCGGGAGTG GAGACCAAAG TCGCCATTCT CAAGAAGAAG TCCGACATGC ACGCGGTCAA CCTGCCCGAC GACGTGGCTC TTTTTCTAGC GGAAGGCGCG AACAGCAACA TCCGCGAGTT GGAAGGGATG CTGATCAGGC TGGAGGCGTT TGCAAGCCTC ACCGGCCAGG AGATAACGCT CAGCATGGCC CGCGAGGTGA TGAAGGACAT CATCGTCGAG AAGACCCGCG ACATCACCGT CGAGATGATA CAGAAGACCG TGGCGGAGCA CTTCCGCATC AAGGTATCCG AACTGAAGTC CGACAAAAGG ATCAAGACCC TCGTGGTACC GCGCCAGATA GCGATCTACA TCTGCCGCGA GCTGACCAAG GCGTCCTACC CGGAAATAGG CGAGAAGTTC GGGGGGAAGG ACCACTCCAC CATCATCCAC TCGGTAAAAA AGATTGAGAA GCAGATCGCG GGTGACGATG AGTTTAAGGC GACTGTGGAA GACATAAGGA AAAAGCTGTT CACTTAA
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Protein sequence | MENIWLEAQT NLKQVLTEQT YSTWIDPLKF LGATVDTIVL EVPSSFFQKW VTDKYLAMIK EAISAVNGKS YQIEFHVAEE KPEAAHEAKP EKEAKPAREK ERDKDKEKEK DREKEKKELV PNLNPKYTFE SFVSGPSNQF AYAASQAVAN KPATNYNPLF IYGGVGLGKT HLVNAIGNHI LAKNPKAKIC YYSSEKFMNE MINSLRYKKM DEFRNKFRKM DLLLIDDIQF MAGKEATQEE FFHTFNALYE SHKQIVVTSD KFPKDIPGLE ERLRSRFEWG LIADIQPPGV ETKVAILKKK SDMHAVNLPD DVALFLAEGA NSNIRELEGM LIRLEAFASL TGQEITLSMA REVMKDIIVE KTRDITVEMI QKTVAEHFRI KVSELKSDKR IKTLVVPRQI AIYICRELTK ASYPEIGEKF GGKDHSTIIH SVKKIEKQIA GDDEFKATVE DIRKKLFT
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