| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_4240 |
|---|
| Symbol | |
|---|
| ID | 6784255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | - |
|---|
| Start bp | 4772811 |
|---|
| End bp | 4774493 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642765707 |
|---|
| Product | dihydroxy-acid dehydratase |
|---|
| Protein accession | YP_002136572 |
|---|
| Protein GI | 197124621 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
|---|
| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGCG ACCGGATCAA GAAGGGCTTC GAGCGTGCGC CCCACCGCAG CCTCCTCCGC
GCGACGGGCC TCAACGACGG CGACTTCGAG AAGCCGTTCA TCGGCATCGC CAACAGCCAC
ATCGACATCA TCCCGGGCCA CTACTACCTG CAGGAGTACG GCCGGATCGC GAAGGACGAG
ATCCGCAAGG CGGGCGGGGT GCCGTTCGAG TTCAACACCA TCGGCGTGGA CGACGGCATC
GCCATGGGCC ACGAGGGCAT GAAGTACAGC CTGCCCTCGC GCGAGCTCAT CGCCGACTCC
ATCGAGACGG TGATGAACGC GCACCAGCTC GACGCGCTCG TCTGCATCCC GAACTGCGAC
AAGATCGTCC CCGGCATGCT CATGGGCGCG CTCCGCGTGA ACGTGCCGAC GGTGTTCGTG
TCCGGCGGGC CCATGAAGGC CGGCCACCTC CACGACGGCA CCCCCATCGA CCTCAACACC
GCGTTCGAGG CGGTGGGCAA GCGCGCGCAG GGGCAGCTGA CCGACGCCGA GCTGTACGAG
ATCGAGTGCC AGGCCTGCCC GTCCGGTGGG TCGTGCTCGG GCATGTTCAC CGCGAACTCG
ATGAACGTGC TGTGCGAGGC CATGGGCGTG GCGCTGCCCG GGAACGGCAC CGTGCTCGCG
CTCACCCCCG AGCGCGAGGC GCTGGTGCGC CGCGCCGCGC GGCGGGCGGT GGAGATCGCC
GCCGACGAGC GCTTCAAGCT GCGGAACATC GCGAACCGCG ACGCCATCCA CAACGCCATG
GTGGTGGACA TGGCCATGGG CGGCTCGTCC AACACCGTGC TGCACATGCT CGCCATCTCG
CGCGAGGCCG GCGCGCCGCT GTCGCTGCGC GACATCGAGG AGATCGCCGG CAAGGTCGCG
CACATCGCGA AGATCGCCCC TTCGCTCGCG ACCGTGCACA TGGAGGACAT CCACCGCGCC
GGCGGCGTCC CGGCGGTGCT GCGCGAGGCG GCCCGCCGCG GCGGCAGCGT CCGCGAGGGC
GCGCTGACCG TGACCGGCGA GACGGTGGGC GAGCGGATCC GCGACGCGCG GACCGCCGAC
CCGGAGCTCA TCCGGCCGCT GGAGAACGCC TACTCGCCGG TGGGCGGCCT GGCGGTGCTG
TTCGGGAACC TCGCCGCCGA GGGCGCGGTG GTGAAGACCG CCGGCATCCA GCCCTCCATG
CGCAGGTTCA CCGGCGCGGC GATCTGCTTC GACTCGCAGG ACGAGGCCAT CGCCGGGATC
ATGGGCGGCA AGGTGAAGCC CGGGCACTTC GTGGTGATCC GCTACGAGGG GCCGAAGGGC
GGGCCCGGCA TGCAGGAGAT GCTCTCCCCC ACCTCGCTCA TCATGGGCAT GGGCCTCGGC
GAGAGCGTGG CGCTCGTCAC CGACGGCCGC TTCTCCGGCG CCACCCGCGG CGCCTGCGTC
GGCCACGTCT CCCCCGAGGC CGCCGAGGGC GGCGTCATCG GCCTGGTGCA GGACGGCGAC
CGGATCACCA TCGACGTGGA GGCGCGCGCG CTGACCGTGG ACGTCCCCGA CGCCGAGCTG
GCGCGGCGCC GCGAGGGGTT CCGGCCGAAG CGCCGCGACC CCGGCTCGTC CTGGCTCCGC
CGCTACGCGC ACCTCGTCAC GAACGCCGCG AACGGCGCGG TGCTGCGGAG CACGGACCTG
TAG
|
|---|
| Protein sequence | MRSDRIKKGF ERAPHRSLLR ATGLNDGDFE KPFIGIANSH IDIIPGHYYL QEYGRIAKDE
IRKAGGVPFE FNTIGVDDGI AMGHEGMKYS LPSRELIADS IETVMNAHQL DALVCIPNCD
KIVPGMLMGA LRVNVPTVFV SGGPMKAGHL HDGTPIDLNT AFEAVGKRAQ GQLTDAELYE
IECQACPSGG SCSGMFTANS MNVLCEAMGV ALPGNGTVLA LTPEREALVR RAARRAVEIA
ADERFKLRNI ANRDAIHNAM VVDMAMGGSS NTVLHMLAIS REAGAPLSLR DIEEIAGKVA
HIAKIAPSLA TVHMEDIHRA GGVPAVLREA ARRGGSVREG ALTVTGETVG ERIRDARTAD
PELIRPLENA YSPVGGLAVL FGNLAAEGAV VKTAGIQPSM RRFTGAAICF DSQDEAIAGI
MGGKVKPGHF VVIRYEGPKG GPGMQEMLSP TSLIMGMGLG ESVALVTDGR FSGATRGACV
GHVSPEAAEG GVIGLVQDGD RITIDVEARA LTVDVPDAEL ARRREGFRPK RRDPGSSWLR
RYAHLVTNAA NGAVLRSTDL
|
|---|
| |