Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AnaeK_4059 |
Symbol | |
ID | 6785529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. K |
Kingdom | Bacteria |
Replicon accession | NC_011145 |
Strand | - |
Start bp | 4588728 |
End bp | 4589837 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 642765528 |
Product | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
Protein accession | YP_002136393 |
Protein GI | 197124442 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGCGCAT ACGGGCAGGG TGAGGGCGCG ACGCTGGGCG AGCGCCGGAA GACGCGGCAG ATCCGCGTCG GCAACGTGCG GATCGGCGGC GACGCGCCCA TCGCGGTGCA GTCGATGACG ACCACGCAGA CCGCCGACGC CGCGGCCACG CTGACCCAGA TCCGGGCGCT GGCCGAGGCG GGCGCCGACG TGGTGCGCCT GGCCGTGCCG GACCAGGACG CCGCCGCCGC GCTGCCGGAG ATCGTGAAGG CCACGCCGGT GCCGCTGGTG GCCGACATCC ACTTCGACTA CCGGCTGGCG CTCGCCGCGC TGAAGGCCGG GATGCACGGC ATCCGCCTGA ACCCCGGCAA CATCGGCTCG CGCGATCGGG TCCGCGAGGT GGTGAAGGCC GCCCGCGAGC GGATGGTGCC GGTGCGCATC GGCGTGAACG CCGGCTCGCT GGAGAAGGAC ATCGTCGAGA AGCACGGCTG GCCCACCGCC GCCGGCATGG TGGAGAGCGC CGAGCGCCAC ATCCGCTTCC TCGAGGACGA GGGGTACCGC GAGATCAAGG TCTCGCTGAA GGCGCACGAC GTCGCCATGA CCGTGCAGGC GAACCGGCTC TTCTCGCGCC AGTTCGACTA CCCGCTCCAC CTCGGCGTCA CCGAGGCCGG CACGCTGCTC GCCGGCACGG TGAAGAGCGC CGCGGGGCTG GGCATCCTGC TGGGCGAGGG CATCGGCGAC ACCATCCGCA TCTCCCTCAC CGCCGATCCG GTCGAGGAGG TGCGGGTGGC GCGCATGCTG CTCACCTCGC TCGGCCTCAA GTTCGGCGGC GCCACGCTCA CCTCCTGCCC GACCTGCGGC CGGTGCTCGG TGGACATGAT CCCGGTCGCC GAGCGCGTCG AGCGCCGGCT CGCCACGCTG AAGGGCGAGG TGCAGGTGGC GGTGATGGGC TGCGAGGTGA ACGGGCCGGG CGAGGCGGCC GCCGCCGACG TCGGGATCGC CTACGGCCAC AACGGCGTGG GCCTGCTGTT CCGCGACGGC AAGATCGTGA AGCGCATGAA GGCGGAGGAG CTGGAGGAGG CGCTGGTGGC CGAGGCCATC CAGATCTCCG GCCAGCGCGC GCCGAAGTAG
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Protein sequence | MGAYGQGEGA TLGERRKTRQ IRVGNVRIGG DAPIAVQSMT TTQTADAAAT LTQIRALAEA GADVVRLAVP DQDAAAALPE IVKATPVPLV ADIHFDYRLA LAALKAGMHG IRLNPGNIGS RDRVREVVKA ARERMVPVRI GVNAGSLEKD IVEKHGWPTA AGMVESAERH IRFLEDEGYR EIKVSLKAHD VAMTVQANRL FSRQFDYPLH LGVTEAGTLL AGTVKSAAGL GILLGEGIGD TIRISLTADP VEEVRVARML LTSLGLKFGG ATLTSCPTCG RCSVDMIPVA ERVERRLATL KGEVQVAVMG CEVNGPGEAA AADVGIAYGH NGVGLLFRDG KIVKRMKAEE LEEALVAEAI QISGQRAPK
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