Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AnaeK_3892 |
Symbol | dapD |
ID | 6785359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. K |
Kingdom | Bacteria |
Replicon accession | NC_011145 |
Strand | - |
Start bp | 4394924 |
End bp | 4395748 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642765362 |
Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
Protein accession | YP_002136230 |
Protein GI | 197124279 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.645934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACT GGAACGACGT GCGGAAGCTG ATCGAGGGGG CCTTCGAGGA TCGGGCCCGG CTGCAGGACC CGCAGGCCAA GGCGGCGGTG GTGAAGGCGC TGCACGGCCT CGACCGCGGC GAGCTGCGGG TGGCGGAGAA GCAGGACGGT GAGTGGAAGG TGAACGCCTG GCTGATGCAG GCGGTGAACC TCTACTTCGG CATCACCGGG ATGGAGACGA CCGAGTTCGG GCCGTTCCAG ACGCGCGACA AGATCCCGCT CAAGAAGGAC CTGGAGAAGG CCGGCGTGCG GCTGGTGCCC GGCGGCGTCG CCCGCTTCGG CTCGCACCTC GAGCCGGGCG CGGTGCTCAT GCCCGGCTTC GTGAACATCG GCGCGCGCGT GGGCGCGAAC TCGATGGTGG ACACCTGGGC CACCGTCGGC TCCTGCGCGC AGGTCGGCGC GAACGTGCAC CTCGCCGGCG GCGTCGGGAT CGGCGGCGTG CTCGAGCCGC CCGGGGCCCG CCCGAACATC ATCGAGGACG GCTGCTTCAT CGGGAGCCGC TGCATCCTGG TCGAGGGCAC CCTCGTCGAG GAGGACTGCG TGCTCGGCGC GAACGTGGTC ATCACCGCGT CCACGCCCAT CATCGACGTG ACCGGGGCGC AGCAGGTGGT CTACAAGGGC CGCGTCCCGG CGCGCTCGGT GGTGATCCCC GGCACGCGCC CGAAGCAGTA TCCGGCCGGC ACCTTCAACA TCCCCTGCGC GCTCATCGTG GGCCGCCGCA GCGCCGCGAC CGACAAGAAG GTCTCGCTGA ACCAGGCGCT GCGCGACTTC GAGGTGCAGG TCTAG
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Protein sequence | MSDWNDVRKL IEGAFEDRAR LQDPQAKAAV VKALHGLDRG ELRVAEKQDG EWKVNAWLMQ AVNLYFGITG METTEFGPFQ TRDKIPLKKD LEKAGVRLVP GGVARFGSHL EPGAVLMPGF VNIGARVGAN SMVDTWATVG SCAQVGANVH LAGGVGIGGV LEPPGARPNI IEDGCFIGSR CILVEGTLVE EDCVLGANVV ITASTPIIDV TGAQQVVYKG RVPARSVVIP GTRPKQYPAG TFNIPCALIV GRRSAATDKK VSLNQALRDF EVQV
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