Gene AnaeK_3891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnaeK_3891 
Symbol 
ID6785358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. K 
KingdomBacteria 
Replicon accessionNC_011145 
Strand- 
Start bp4393811 
End bp4394917 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content77% 
IMG OID642765361 
Productsuccinyl-diaminopimelate desuccinylase 
Protein accessionYP_002136229 
Protein GI197124278 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01900] succinyl-diaminopimelate desuccinylase 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.909274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCCGG CGACCGCCGA GCTGGCCGAG GCGCTGGCCC GCCACACCGA GGCGCTGTGC 
GGCGTGCTCT CGCCCATCGG CCACGAGCGC GCGCTCTGCG ACCAGGTCGA GGCCTGGGCG 
CGGGCGCTCG GGCTCGGCGT GCGCCGGGTG AAGGACTCGC TGGTGGTCCG GGTGGACGCC 
GGCGCCGGCG CCGAGGCGGC GCGCGAGGGC CGGCCGCGGG TGGCGCTGTG CGGCCACCTC 
GACACCGTGC CGGTGCACGA GGACGACCGC GGGCCGCCGC GCCGCGACGG CGGGCGGCTC 
ATCGCGCCGG GCAGCTCGGA CATGAAGGGC GGGCTCGCCC TCATGATGGA GGTGGCCGAG 
CGGCTGCCGC GCGCCGAGCG CTTCTGCGAG CTGCTGCTCG TGTTCTACGC GCGCGAGGAG 
GGGCCGTACC TCGAGAACGA GCTCGCCGAC GTGCTCCACG CGGCGGACGA GCTCTCGGGC 
ACCGAGCTCG CCATCTGCCT GGAGCCGACC GACAACGTGC TCCAGCTCGG CTGCGTCGGC 
TCGATCCACG CCACGTTCAC GTTCGAGGGG CGGGCCGCCC ACTCCGCCCG GCCGTGGCAG 
GGCGAGAACG CGGTGCACCG GGCCGGCGCG CTGCTCGCCG AGCTGCACGC CCGGGCGCCG 
CGCGAGGCGG TCTCCGGGGG CCTCGTGTTC CGCGAGGTGA CGAGCGTCAC CCGGATCGAG 
GGCGGGCGCG CGCGCAACGT GGTGCCGGAC CGCTGCACGC TCAACGTGAA CCACCGCTTC 
GCGCCGGACC GCACGCTGCA GCAGGCCTCG GCCGAGCTGC GCGCGCTCGG CGAGCGCGTC 
GGCGCCGAGG TGGAGCTGAC CGACCTCTCT CCGGCCTGCC CCGCCTACGC CGATCACCCG 
CTGGTGCGCC GCCTGCTCGA GCGCACCGGC GTCGCGGCCG AGCCGAAGCA GGCCTGGACC 
GACGTGGCCC GGCTCGCCGC CCACGGCATC CCGGCGGTGA ACCTCGGCCC CGGCGCCACC 
GCGCAGGCCC ACCAGCGGGG CGAATGGGTG GAGCTCGCCG CGCTGGAGCG CGGGTACCGG 
CTGCTGGAGC GGTTCCTGCG CGCCTGA
 
Protein sequence
MDPATAELAE ALARHTEALC GVLSPIGHER ALCDQVEAWA RALGLGVRRV KDSLVVRVDA 
GAGAEAAREG RPRVALCGHL DTVPVHEDDR GPPRRDGGRL IAPGSSDMKG GLALMMEVAE 
RLPRAERFCE LLLVFYAREE GPYLENELAD VLHAADELSG TELAICLEPT DNVLQLGCVG 
SIHATFTFEG RAAHSARPWQ GENAVHRAGA LLAELHARAP REAVSGGLVF REVTSVTRIE 
GGRARNVVPD RCTLNVNHRF APDRTLQQAS AELRALGERV GAEVELTDLS PACPAYADHP 
LVRRLLERTG VAAEPKQAWT DVARLAAHGI PAVNLGPGAT AQAHQRGEWV ELAALERGYR 
LLERFLRA