| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_3754 |
|---|
| Symbol | |
|---|
| ID | 6787443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | - |
|---|
| Start bp | 4221270 |
|---|
| End bp | 4223018 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642765226 |
|---|
| Product | SSS sodium solute transporter superfamily |
|---|
| Protein accession | YP_002136094 |
|---|
| Protein GI | 197124143 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.40696 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGACCCG TCGCCTGGAC CTGGGTGCTG GTCGGCGCGT CCTTCGCGCT CTACGCGCTC
GCCGGCCTGT GGGGCCGCGC GCGGACCACC AGCGCGTACT ACGTGGCGGA GAAGCAGGTC
AGCCCGGTGC TGAACGGGAT GGCGACCGGC GCGGACTGGA TGTCCGCGGC GTCGTTCATC
TCGATGGCCG GGGTGGTGGC GCTGCTCGGC CGCGACGGCT CGATCTTCCT GATGGGCTGG
ACCGGCGGCT ACGTGCTGCT GGCGGTGCTG CTCGCCCCGT ACCTGCGCAA GTACGGCAAG
TACACGGTCC CGCAGTTCGT GGGCGAGCGC TACTACTCGC GCACGGCGCG CGGGGTGGCG
GTGGTGTGCG CGGTGTTCGT CTCGTTCACC TACGTGGCCG GGCAGATGCG CGGGGTGGGG
GTGGTGTTCG CGCGCTTCCT GGACGTGCCG GTGGAGCGCG GCGTGCTGCT CGGCATGGCC
ATCGTGCTGT TCTACGCGGT GCTGGGCGGC ATGAAGGGCG TCACCTACGC GCAGGTGGCC
CAGTACGTCG TGCTCATCGC CGCGTACCTG GTGCCGGCCA TCTTCGCGTC GATCATGCTC
ACCGGGAACC CGGTCCCGCA GCTCGGGCTG GGCGGCCGGG TCAGCGCGGA GGGCGCCCGG
ATCCTGGGGG TCGAGCCGGG GGTGCACCTG CTCCAGGTGC TCGACCGGAT CGGCGAGGAC
CTCGGCTTCG GCCGCTACAC CGCCGGCGCG CGGCCCCGCA TCGACGTGCT GTTCAGCACG
CTGGCGCTCA TGATCGGCAC GGCCGGCCTG CCGCACATCA TCATCCGGTT CTTCACCGTG
CCGAAGGTGC GCGACGCCCG CGCCTCCGCC GCCTGGGCGC TCCTGTTCAT CGCGCTGCTC
TACACCACCG CGCCCGCGGT GGCGGCGTTC GCCCGGGCCG GGATGATCCA GTCGCTGAAC
GGCAAGCGCC ACGCGGACGC GCCGGCCTGG GTGGCGGACT GGGAGCGCAC CGGCCTGGTG
CGGTTCACGG ATCGCGACGG CGACGGCGTG ATGCGCCTCT CCGGCGATCC GGCCCGCAAC
GAGGTGCGGA TCGACCCGGA CGTGCTGGTG CTGGCGAACC CGGAGATCGC CGGCCTGCCG
CCCTGGGTGG TGGGGCTGGT GGCGGCGGGC GCGCTCGCGG CGGCGCTCTC CACCGCGGCG
GGCCTGCTGC TCGTCATCTC GGCGGCGGTG GCGCACGACC TCGTGAAGGG CATGTGGATC
CCGCGCGTCT CCGAGCGCGG CGAGCTGGCC TGGGCGCGCG GCGCGGCGAC CGTGGCGGTG
CTGGTGGCGG GCTGGCTGGG CGTCCACCCG CCCGGCTTCG TGTCCGAGGT GGTGGCGCTC
GCGTTCGGCC TGGCCGCGTC GTCGTTCTTC CCGGTGCTGG TGGCCGGCAT CTTCTGGCGG
CGCGCCACGC GCGAGGGGGC CATCGCCGGG ATGGTGAGCG GGCTCGCGGT GACCACCGCC
TACGTCCACT GGTTCAAGTT CTGGCACCCG GAGCTGGACG TCCCGGCGCA CTGGTGGCTG
GGGATCTCGC CGCAGGGGTT CGGGACGGTG GGCATGCTGG TGAACCTCAC CGTCCTCGTC
GTCGTGTCCC TGCGGACGCC GGCGCCGCCG CAGGCGGTGC AGGACCTGGT CACGAACCTG
CGCTATCCGC GGGAGCCGGT GCGCCCGGCG CCGGCGCCCA CCGCGCTGCG CGTGGGCGAC
GGCCGCTGA
|
|---|
| Protein sequence | MGPVAWTWVL VGASFALYAL AGLWGRARTT SAYYVAEKQV SPVLNGMATG ADWMSAASFI
SMAGVVALLG RDGSIFLMGW TGGYVLLAVL LAPYLRKYGK YTVPQFVGER YYSRTARGVA
VVCAVFVSFT YVAGQMRGVG VVFARFLDVP VERGVLLGMA IVLFYAVLGG MKGVTYAQVA
QYVVLIAAYL VPAIFASIML TGNPVPQLGL GGRVSAEGAR ILGVEPGVHL LQVLDRIGED
LGFGRYTAGA RPRIDVLFST LALMIGTAGL PHIIIRFFTV PKVRDARASA AWALLFIALL
YTTAPAVAAF ARAGMIQSLN GKRHADAPAW VADWERTGLV RFTDRDGDGV MRLSGDPARN
EVRIDPDVLV LANPEIAGLP PWVVGLVAAG ALAAALSTAA GLLLVISAAV AHDLVKGMWI
PRVSERGELA WARGAATVAV LVAGWLGVHP PGFVSEVVAL AFGLAASSFF PVLVAGIFWR
RATREGAIAG MVSGLAVTTA YVHWFKFWHP ELDVPAHWWL GISPQGFGTV GMLVNLTVLV
VVSLRTPAPP QAVQDLVTNL RYPREPVRPA PAPTALRVGD GR
|
|---|
| |