| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_3561 |
|---|
| Symbol | |
|---|
| ID | 6787245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | + |
|---|
| Start bp | 4023680 |
|---|
| End bp | 4024381 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 642765032 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002135903 |
|---|
| Protein GI | 197123952 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.888825 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGACC GCATCGCGCT GGTGACCGGG GCCGGAGTCC GGGTGGGCGA GGCGATCGCC
CGCGCGCTGG CGAAGGACGG CTGGACCGTC GCCGCGCACT ACCGCACGCA CCGCCCGCGC
GGCTTCGCCT CCGCGCTGCA GGCCGACCTC GCCGCCGCCG ACGGGCCGGC CCGGCTCGCG
GCCGCGTTCC GCGCGCGGCA CCGCCGCCTC GACCTGCTGG TGAACAGCGC CTCGGTGTTC
GACGCGCTCC CGCTGGCCGG CACCGACGCC GCGGCGTTCG ACTCGCAGAT GGACCTGAAC
GCGCGGGCGC CGCTCCTGCT CGTCCGGGCG CTCGCGCCGC TGCTGGCGCG GGCGCGCGGC
TCCGTGGTGA ACGTCATCGA CGTGGGCGGG GGGCTGGTGC CGTGGAAGGG CTACGCCGCC
TACGCGGCCT CGAAGGCGGC GCTGGCGCGG CTGACCGAGT GCCTGGCGCT CGAGCTGGCG
CCCCGGGTGC GCGTGAACGG CGTGGCCCCC GGCACCGTGC TCTGGCCGGA GCGCTACCCC
GCGGCGCAGC GGCGCGCGCT CACCGCGCGC ATCCCGCTCG GGCGGCCGGG AACGCCGGAA
GACGTGGCGG CCGCCGTGCG TTATCTCGCC GACGCGCCGT TCGTCACCGG CGCCGTGCTG
CCGGTGGACG GAGGGCGCCA CCTGTCCGGA CGCGCCGGCT GA
|
|---|
| Protein sequence | MADRIALVTG AGVRVGEAIA RALAKDGWTV AAHYRTHRPR GFASALQADL AAADGPARLA
AAFRARHRRL DLLVNSASVF DALPLAGTDA AAFDSQMDLN ARAPLLLVRA LAPLLARARG
SVVNVIDVGG GLVPWKGYAA YAASKAALAR LTECLALELA PRVRVNGVAP GTVLWPERYP
AAQRRALTAR IPLGRPGTPE DVAAAVRYLA DAPFVTGAVL PVDGGRHLSG RAG
|
|---|
| |