Gene AnaeK_3531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnaeK_3531 
Symbol 
ID6784661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. K 
KingdomBacteria 
Replicon accessionNC_011145 
Strand
Start bp3991748 
End bp3992320 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content76% 
IMG OID642765002 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002135873 
Protein GI197123922 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0696156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATC ACGGACGCGC CGCACCGTTC CTCGAAGCCG GCGATCACCG GGGGGCCGCC 
GAGGCGGTCC TCCGCGAGTA CGGCCCGCAG CTCCTCGGCT ACCTCTCCTC CATCCTCCGC
AACGACGCCG ACGCGGCCGA GGTGTTCTCC CAGTTCACCG AGGACCTCTG GCGCGGCCTC
CCCGGCTTCC GCCGCGAGTG CCCGGTCCGC GTGTGGGCCT ACCGGCTCGC CTGGCACGCC
GCGGCCCGCC ACCTGCGCGA CCCCTACCGC GGACGGGGCC GCCGCCTCGA GACCCACGAG
CTGTCGCGCA TCGCCGACGA GGTCCGCTCG TCCGCGCTGC TCGGGCGGCG CGAGGCGCGG
CAGCGCGGCA TCGACCGGCT GCGCGCCCGC CTGCAGCCGG ACGAGCAGAC GCTCCTGGTC
CTGCGGCTCG ACCGGGGGCT CTCCTGGCGC GAGGTCGCGA CCGTGCTCGC CGACGAGGGC
GACGCGGTGG ACGAGCCGGC GCTGCGCAAG CGCTTCGAGC GGCTGAAGGA GAAGCTCGCG
CGCATGGCGC GGGAGGAGGG GCTGCTCGAG TAG
 
Protein sequence
MTDHGRAAPF LEAGDHRGAA EAVLREYGPQ LLGYLSSILR NDADAAEVFS QFTEDLWRGL 
PGFRRECPVR VWAYRLAWHA AARHLRDPYR GRGRRLETHE LSRIADEVRS SALLGRREAR
QRGIDRLRAR LQPDEQTLLV LRLDRGLSWR EVATVLADEG DAVDEPALRK RFERLKEKLA
RMAREEGLLE