| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_2169 |
|---|
| Symbol | |
|---|
| ID | 6788213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | + |
|---|
| Start bp | 2440168 |
|---|
| End bp | 2441064 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642763629 |
|---|
| Product | tyrosine recombinase XerD |
|---|
| Protein accession | YP_002134525 |
|---|
| Protein GI | 197122574 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.167772 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCGC TGGAGCCCGC CCTCGACCTG TTCCTCGCCC ACGTGCGCGT GGAGAAGGGG
CTCGCCGAGA ACAGCGTCGA GGCCTACGGG CGCGACCTGC GCCGCTACCT CGAGCACCTG
GACGAGCTGG GGGTGGACGC CTGGGAGCGG GTGGGCCGCG GCGAGATCCA GGCCCACCTC
GCCGAGCTGG TCCGCCGCGG CCTCTCGCCG CGCTCGCAGG CGCGGGCGCT CTCCGCCATC
CGCTCGCTGC ACAGGCTCCT CGCGGCCGAG CGCGTCACCT CCGCCGATCC GTCGGACGAG
ATCGAGTCGC CGCGGCCCGG GCGCCGCCTC CCGGGGCTGC TCTCGCACGA CGAGGTGGAC
CGCCTGCTGG CCGCGCCGGA CGTGCGCAGC GCCGCCGGGA TCCGCGACCG CGCCATGCTG
GAGCTGCTCT ACGCGACCGG GCTGCGCGTC TCGGAGCTGG TCTCGCTCCA GCTGAACGAC
GTGAACCTGG AGACGCGGGT GCTCATCGCC CGCGGCAAGG GGAACAAGGA GCGGATCGTG
CCGGTGGGCG CGCCCGCCGC CGAGGCGGTG AAGGCGTACC TGGCGGTCGC GCGGGAGCGG
CTGCTCCACG GCCGCCGCTC GAAGGACCTG TTCGTCACCC CGCGCGGCGG CCGGATGACG
CGGCAGGGGT TCGCGAAGAT CCTGGACCGC TGCGCCCGGC GCGCCGGGAT CCGGCGGCGC
ATCTCGCCGC ACAAGCTGCG GCACTCCTTC GCCACCCACC TGCTGGAGGG GGGCGCCGAC
CTGCGCGCGG TCCAGGAGAT GCTGGGCCAC GCCGACGTCT CCACCACGCA GATCTACACC
CACGTGGATC GCACCCACGT GAAGCGGCTG TACGACCGCT TCCACCCCCG CGCCTGA
|
|---|
| Protein sequence | MSALEPALDL FLAHVRVEKG LAENSVEAYG RDLRRYLEHL DELGVDAWER VGRGEIQAHL
AELVRRGLSP RSQARALSAI RSLHRLLAAE RVTSADPSDE IESPRPGRRL PGLLSHDEVD
RLLAAPDVRS AAGIRDRAML ELLYATGLRV SELVSLQLND VNLETRVLIA RGKGNKERIV
PVGAPAAEAV KAYLAVARER LLHGRRSKDL FVTPRGGRMT RQGFAKILDR CARRAGIRRR
ISPHKLRHSF ATHLLEGGAD LRAVQEMLGH ADVSTTQIYT HVDRTHVKRL YDRFHPRA
|
|---|
| |