Gene AnaeK_1965 details

Gene Information

• Locus tag: AnaeK_1965
• ID: 6785757
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter sp. K
• Kingdom: Bacteria
• Replicon accession: NC_011145
• Strand: +
• Start bp: 2214922
• End bp: 2215416
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 78%
• IMG OID: 642763422
• Product: 16S rRNA processing protein RimM
• Protein accession: YP_002134322
• Protein GI: 197122371
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.863851
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCGCTCG TCCGGATCGG GAAGGTGGTC CGGGCGCTCG GGCTGAAGGG CCACCTGGGC 
GTGGCCGGGT CGGAGGGCGC GCTCGGGACG CTCGAGCGCG TCGTGCTCCG GCACGGCGCG 
GCCGGGCAGG TGGAGCGGAA GGTGCTGGAG GCGCGGCCGC AGGGGCGCCT CTGGGCGGTG 
CGGATCGACG GCGTCGCCGA TCGCACCGGC GCCGAGGCGC TGGTCGGGGC CGAGGTGCTG 
GCGCCCCGCG AGGCCCTGGG CGAGGCGGGA GAGGGCAGGC ACTACTGGGG CGACCTGGAG 
GGCCTGCCGG TGGTGACCGT CCAGGGCGAG GCGCTCGGGA CGGTGACCGG GCTGATGGAG 
ACCGGCGCGG TGGACGTGCT GGTGGTGCAG GGCGCGCGGG GCGAGCTGCT GGTGCCGCTC 
GCGCCGTACG TCGAGGTGGA TCGCGCGGCG GGTCGCGTGG TGGTGGACCC GCCGGAAGGG 
CTCCTGGAGC CGTAG 

 

Protein sequence

MALVRIGKVV RALGLKGHLG VAGSEGALGT LERVVLRHGA AGQVERKVLE ARPQGRLWAV 
RIDGVADRTG AEALVGAEVL APREALGEAG EGRHYWGDLE GLPVVTVQGE ALGTVTGLME 
TGAVDVLVVQ GARGELLVPL APYVEVDRAA GRVVVDPPEG LLEP