Gene AnaeK_1448 details

Gene Information

• Locus tag: AnaeK_1448
• ID: 6788334
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter sp. K
• Kingdom: Bacteria
• Replicon accession: NC_011145
• Strand: +
• Start bp: 1641806
• End bp: 1642423
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 642762906
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_002133808
• Protein GI: 197121857
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.248781
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGGCGG AGCGCAAGGC GGCGGGCGGG GAGGAGGCGG GGGCGGCGGA CGCCGCCGAC 
GTCGCGGCCG CCCTGCGCGG CGATCGCGCC GCCCAGCGCG CGCTCTACGA CCGGTACCGT 
CCGGCGGTGC ACCGGCTGGC GCGCAGCTTC CCGGCGCTCG ACGCGGACGA CGCCGAGGAC 
GTGGTGCAGG ACGCGTTCGT CCGCGCGTTC GCGAGCCTGG CCCGGCTGGA GCAGCCGGCG 
CGCTTCGGCG GCTGGCTGCT CACCATCGCC CGCAACCGGG CCATCACCCG CATCGCCCGC 
GGGCGGGCGC GGAGCCAACT CGCCGAGGAG CTGGGGCGCG AGGCCGAGGC GCTGGGGGCG 
AGCGAGGCCG AGGCCCCGGA TCCCGAGGCC GGCGCCGAGC TGGAGCTGGT GCGCCGGGTG 
GTGGACGAGC TGCCGGAGGG GCCGGAGAAG GAGACGGTCC GGCTCTTCTA CCTGGAGGGC 
CAGCTCACCG CGCGCGAGAT CGCGGCCCGG CTGGGCGTGG GCAAGAGCGC GATCACCATG 
CGGCTCGAGC GGTTCCGGGC CAAGGTGAAG CGTCGGCTGC TGGCCGAGGT GGCCAGGCTG 
CGGGGTGAGG AGTCCTAG 

 

Protein sequence

MTAERKAAGG EEAGAADAAD VAAALRGDRA AQRALYDRYR PAVHRLARSF PALDADDAED 
VVQDAFVRAF ASLARLEQPA RFGGWLLTIA RNRAITRIAR GRARSQLAEE LGREAEALGA 
SEAEAPDPEA GAELELVRRV VDELPEGPEK ETVRLFYLEG QLTAREIAAR LGVGKSAITM 
RLERFRAKVK RRLLAEVARL RGEES