| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_1366 |
|---|
| Symbol | |
|---|
| ID | 6786383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | - |
|---|
| Start bp | 1551652 |
|---|
| End bp | 1553019 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642762823 |
|---|
| Product | tRNA pseudouridine synthase D TruD |
|---|
| Protein accession | YP_002133726 |
|---|
| Protein GI | 197121775 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0585] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.206358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTCA AGCAGCGACC GGAGGACTTC CAGGTGACGG AGTCCTGGAA GTTCGACGAG
GACCCCCGCG GCGCCTGGTT CGTCTACCTG ATGGACAAGC AGAAGCTGTC GACCTTCGAG
GCGGTCGACC GCATCTGCAC GCGCTTCAAG ATCCCGCGGG CGTCGGTGAG CTACTGCGGG
CTGAAGGACA AGCAGGGGCG CACCACCCAG CTCGTGGCCA TCGAGCGCCG CGAGATCGAG
CTGCAGGACA CCGACCTGCG CCTCAAGCCG CTCGGCCGGA GCCGCACGCC GCTGTCCGCC
GCGAACACCA CCTCCAACCG CTTCGCGGTG ACGGTGCGCG ACCTCGGCGA GGACGACGTG
GCGCGCCTGC CCGCGTCGGT GGCCGAGGTG CGCCGGCTCG GCGTCGTGAA CTACTTCGAC
TCGCAGCGCT TCGGCTCGCT GAAGCACGGC CAGGGCTTCA TCGTGAAGGA CCTGATGCGC
GGCGACTTCG AGATCGCGCT GCGCAACGTC CTGGCGCGCC CGAGCGAGCT GGACCAGTCC
GGCGACGCGA AGGTGAAGGC GTTCTGGAAG GAGCACTGGG GCGAGTGGGA CCGGCGCAAC
CCGAACCCGG GCGCCGAGCG CTACCAGGCG GTGGTGAAGT GGCTGCGCGA TCACCCGGAG
GACTACCGGG GCGCGCTGCT CCGCACCGAG CCGCGCTGGC GCGGGCTGCA GGTGTTCGCC
TACCAGAGCT GGCTCTGGAA CGAGGGCGTG AAGCAGTACC TGCGCGAGGT GGTGGGGATC
CAGCGGCTCG TGTCGCTGCG CTACCAGGCC GGGTCGCTCC TGTTCCCGCG CGAGCTGGAC
GCGGCGCTGG TGCGGCTGCT CTCCTCGAAG ACCTTCCCGC TGCTCGCGCC GTCCACCCGC
TTCGACGACC CGGCGGTGGA GCGCGCCGCG CTGTCGGTGC TCGGCCGCGA GGACATGGGG
CTCGCGGACC TGGCGGTGCC GGGGACGCCG GAGATCCACT TCGACCCCGA GGAGCGGCCG
CTGTTCTCGT TCCCGGGCCG CCTCGCGGTG GGCGAGGCGC GCCCGGACGA GCTGAACCGC
GACCGGTTCC GGGTGAACGT CGCCTTCACG CTGCCGCCGG GCGCGTACGC GACGCTGGTG
GTGAAGCGGC TGTTCCACTG GACGCTCGAG CCGCGCCGCG CGCGCGAGGG CGTCCGGTCC
CGGGCACCCG CCCCGTCCAC GCGGGGCGCG CCGGAGGCGG AACGGCCGGT CGAGGCGCCG
CGCGCGCCCG CCGCGCCGAA GGGCTTCCTG GCCCGCAAGC GCGCCGAGAA GGCCGCGCGC
GCGGAGCGTC GCGCGGCGGG CAAGGCGACG GCGAAGCCGA GGCGCTGA
|
|---|
| Protein sequence | MRLKQRPEDF QVTESWKFDE DPRGAWFVYL MDKQKLSTFE AVDRICTRFK IPRASVSYCG
LKDKQGRTTQ LVAIERREIE LQDTDLRLKP LGRSRTPLSA ANTTSNRFAV TVRDLGEDDV
ARLPASVAEV RRLGVVNYFD SQRFGSLKHG QGFIVKDLMR GDFEIALRNV LARPSELDQS
GDAKVKAFWK EHWGEWDRRN PNPGAERYQA VVKWLRDHPE DYRGALLRTE PRWRGLQVFA
YQSWLWNEGV KQYLREVVGI QRLVSLRYQA GSLLFPRELD AALVRLLSSK TFPLLAPSTR
FDDPAVERAA LSVLGREDMG LADLAVPGTP EIHFDPEERP LFSFPGRLAV GEARPDELNR
DRFRVNVAFT LPPGAYATLV VKRLFHWTLE PRRAREGVRS RAPAPSTRGA PEAERPVEAP
RAPAAPKGFL ARKRAEKAAR AERRAAGKAT AKPRR
|
|---|
| |