Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AnaeK_1015 |
Symbol | |
ID | 6785218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. K |
Kingdom | Bacteria |
Replicon accession | NC_011145 |
Strand | - |
Start bp | 1150422 |
End bp | 1151162 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642762467 |
Product | Rhomboid family protein |
Protein accession | YP_002133379 |
Protein GI | 197121428 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCCCGC TCAGCGACGA CGTCCCCACC GAACGCACAC CGGCGGTCAC CCTGCTCTTC ATCGCGGCGA ACGTGCTCGC GTTCCTGTGG CAGGTGGACG TGCTCGCCCT GCCCGACGCG CTCGCCTCCG GCCGCCTCAT GGAGTACGTG GCCGCGCGCC TGGGCGACAC CGCGCTCCGC GGCGGGGTGG TGCCGTTCGA GATCCTGACG TTCTCCGACG TCTACCCGCG CGACCTCGTG CCGCCGCCGC TCACCGTCCT CACCGCCATG TTCCTGCACG GGGGGCTGGT CCACGTCGGC TCCAACATGC TGTTCCTGTG GATCTTCGGG AACAACGTGG AGGACGCGCT GGGGCGCGGG CGCTTCGTGC TGTTCTACCT CGCGTGCGGC GTGGTGGCCG CGGTGGTCCA GGTGGTCGCC TCGGCGGCCA CCGGCGATCT CGAGGTCCCG ATGGTGGGCG CGAGCGGCGC CATCGCCGGC GTGCTGGCCG CCTACATGGT GCTGTTCCCC CGGGCCCGGG TGACCACGCT CGTCATCATC GTGATCTTCA TCCGGATCAT CCCGGTGCCG GCCGCGTTCT TCATCGGCCT GTGGTTCCTG CTGCAGGTCC TCTCCATCTT CTTCGGCGGC AACACCGGCG TGGCGCTGTT CGCGCACGTG GGCGGGTTCG TGGCGGGGTG GCTGCTGGTG CGGCTCATGG GGCGGCGCCC GACCTGGCGC GCGCGCCGGG TGAGCTGGTA G
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Protein sequence | MIPLSDDVPT ERTPAVTLLF IAANVLAFLW QVDVLALPDA LASGRLMEYV AARLGDTALR GGVVPFEILT FSDVYPRDLV PPPLTVLTAM FLHGGLVHVG SNMLFLWIFG NNVEDALGRG RFVLFYLACG VVAAVVQVVA SAATGDLEVP MVGASGAIAG VLAAYMVLFP RARVTTLVII VIFIRIIPVP AAFFIGLWFL LQVLSIFFGG NTGVALFAHV GGFVAGWLLV RLMGRRPTWR ARRVSW
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