Gene AnaeK_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnaeK_0789 
Symbol 
ID6786215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. K 
KingdomBacteria 
Replicon accessionNC_011145 
Strand
Start bp900700 
End bp901548 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content74% 
IMG OID642762241 
ProductRNA polymerase sigma factor SigJ 
Protein accessionYP_002133154 
Protein GI197121203 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGACG CGGCGAGCGG CTTCGAGCCG CACCGGGCCG ACCTGGTGCA GGTCGCCTAC 
CGGATGCTCG GCTCGGTGGC CGAGGCGGAG GACGTGGTGC AGGACGCGTT CCTGCGCTGG
AACGGCGCGG CGCGCGACGG GGTCGAGTCG CCGCGCGCGT ACCTCATCCG CACCGTCACG
CGGCTCTGCC TCGACCGTCT GAAGTCCTCG CGCGCCCAGC GGGAGGAGTA CGTGGGGACG
TGGCTGCCGG AGCCGCTGGT GGAGGCGGAG GGCACGGGGC TGGCGCACGA CCTCTCGATC
GCGCTGCTCG TCACCTTGCA GCGCCTCTCG CCGCTGGAGC GCGCCGCGTT CCTGCTCCAC
GACGTGTTCG ACATGGGCTT CGCCGACGTG GCCGGCGTGC TGGAGCGCTC CGAGCCCGCG
GTCCGCCAGC TCGCGGCCCG CGCGCGCGGG CACGTGCGCG AGGCGAGGCC ACGCTTCCGC
GCGTCCGACG AGGAGGCGCG GCGGCTCGCC GACGCGTTCC AGGCGGCGCT GGCGAGCGGC
GACCTCGGGA CGCTCTCGCG GCTGCTCGCG GAGGACGCGG TGTTCTACGC GGACGGCGGC
GGCAAGCGCG CGGCGGTGCT CCAGCCGCTC GAGGGCCGGG CCGCCATCGT GCGGTTCCTC
GAGAAGATCG TGAAGCACCC CGCCTTCCCG GGTGCGAGGT CCTACCAGCC CGCATGGATC
AACGGCATGC CGGGCTTCGT GGTGCACGGC CCGGAGGGCG TCGAGACCCT GGCGATCGAG
ATCGGCGACG GGCGGGTGGT GGGGATCTAC GCCGTGCGCA ACCCGGACAA GCTCCGCCAC
CTCTCGTAG
 
Protein sequence
MTDAASGFEP HRADLVQVAY RMLGSVAEAE DVVQDAFLRW NGAARDGVES PRAYLIRTVT 
RLCLDRLKSS RAQREEYVGT WLPEPLVEAE GTGLAHDLSI ALLVTLQRLS PLERAAFLLH
DVFDMGFADV AGVLERSEPA VRQLAARARG HVREARPRFR ASDEEARRLA DAFQAALASG
DLGTLSRLLA EDAVFYADGG GKRAAVLQPL EGRAAIVRFL EKIVKHPAFP GARSYQPAWI
NGMPGFVVHG PEGVETLAIE IGDGRVVGIY AVRNPDKLRH LS