| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_0468 |
|---|
| Symbol | |
|---|
| ID | 6788149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | - |
|---|
| Start bp | 543125 |
|---|
| End bp | 544378 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 642761920 |
|---|
| Product | nuclease SbcCD, D subunit |
|---|
| Protein accession | YP_002132837 |
|---|
| Protein GI | 197120886 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0420] DNA repair exonuclease |
|---|
| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCATCC GCATCCTCCA CACCGCCGAC TGGCACCTCG GCCACGCGCT CCACGGCGTG
GACCGCGGCC CCGAGCACGA GCGCTTCGTG GCGTGGCTGC TCGACACCGT CGAGGCCGAG
GCGGTGGACG CGGTCATCGT GGCGGGGGAC GTGTTCGACG CCTCCAACCC GCCCGCCGGC
GCGCAGGCGC TCTGGTATCG CTTCCTGGCC GAGGCCTGGC GGCGCCTGCC GCGGCTGCAG
CTCGTGGTGG TGGGCGGGAA CCACGACTCC GCCTCGCGGC TCGACGCGGT GGACCCGCTG
CTGCGCGAGA TGGGCCGCCT GCACGTGGTG GGGGGCGTGC CGCGCGCCGC CGCCGGCGCG
CCGGATCTGG AGCGGCTGCT CGTGCCGCTG GAGGACGCGT CGGGCCGGCG GGCGGCCTGG
GTGGCGGCGG TGCCGTACCT GCGCGCCGCC GATCTGGGCG CGGGCGCGGC CGACGACGAC
GCCGCCGAGG CCACCCGCCG GTTCTACGCC GCCGCGGTGG AGCGGGTGCG GGCGCGGCGC
GCGCCGGGCG AGGCGCTCCT CGCCACCGGC CACCTCTATG CGGTGGGCGG GAAGACCTCG
GAGCTCTCCG AGCGGCGGCT CGCGGTGGGC AACCAGGCCG CGGTGCCGGC CGACGCGTTC
CCCGCCGACC TCGCCTACGT CGCGCTCGGC CATCTGCACC TCGCGCAGGC GGTGGGCGGG
CGCGAGACGG TGCGCTACTC GGGCTCGGTG CTGCCGCTCT CCTTCGGCGA GCGCGGCTAC
CGCCACGGCG TGGTGGTGGC CGACGTGGAG GGCGAGGCGG TGCGCGCGCA GCGGGTGCTG
CGCGTGCCGC GCTTCGTGGA GCTCGTGTCG GTGCCGGACG CCGAGGCGCC CGCGCCGCTC
CCGGAGGTGC TCGCCGCGCT CGAGGCGCTG CCCGCGCGCG GCGACGGGCC GGACGCGCTG
CGGCCGCTCC TCGAGGTGAA GGTGCGGCTG GAGCGGCCCG AGCCGGCGCT GCGCGCGCTG
CTCGACCAGG CGCTCGCGGG CAAGGAGGCG CGCCTCGTGC GCATCGCCAC CACGCTCGCC
GGCACCGGCC GCGCGCTGGG CGACGGCGAG CGGCGCGCGC TCGGCGACCT CGTGCCGGAG
GAGGTCTTCC GGCGAAAGTA CGACGCCGAC TACGGCGGGC CGCCGCCCGA CGCGCTCCTG
GAGGCGTTCC GCGCGCTGCT CCAGGAGGTC GAGTCGGAGG AGGGCGCGCG GTGA
|
|---|
| Protein sequence | MAIRILHTAD WHLGHALHGV DRGPEHERFV AWLLDTVEAE AVDAVIVAGD VFDASNPPAG
AQALWYRFLA EAWRRLPRLQ LVVVGGNHDS ASRLDAVDPL LREMGRLHVV GGVPRAAAGA
PDLERLLVPL EDASGRRAAW VAAVPYLRAA DLGAGAADDD AAEATRRFYA AAVERVRARR
APGEALLATG HLYAVGGKTS ELSERRLAVG NQAAVPADAF PADLAYVALG HLHLAQAVGG
RETVRYSGSV LPLSFGERGY RHGVVVADVE GEAVRAQRVL RVPRFVELVS VPDAEAPAPL
PEVLAALEAL PARGDGPDAL RPLLEVKVRL ERPEPALRAL LDQALAGKEA RLVRIATTLA
GTGRALGDGE RRALGDLVPE EVFRRKYDAD YGGPPPDALL EAFRALLQEV ESEEGAR
|
|---|
| |