| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AnaeK_0248 |
|---|
| Symbol | |
|---|
| ID | 6785147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. K |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011145 |
|---|
| Strand | + |
|---|
| Start bp | 273759 |
|---|
| End bp | 277529 |
|---|
| Gene Length | 3771 bp |
|---|
| Protein Length | 1256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 642761701 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_002132619 |
|---|
| Protein GI | 197120668 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCAC GCCTCGCCGC CCTGCTCGCG CTCTGCCTCG CCTCGACGGG GTCCGCCCGC
GCGCTGTCGC CGCTCCCGCC GCCCACCGGC CTCGACCCCG AGGCGGAGCG CGCCGCCGCG
GCGGTGGCGG CGCTCGACCG CGAGCGGCGC GGGCCCCGCG GCCTCGCCGC CCTGGCCGAG
CTGGACGCGC TCGCCGACGA CCTGCCCGAG CTCGCCCACC TCGCCGCCGC CTACGCCCGG
GCCGCCGACG ATCGCGAGGC GCACCCGGAG GTCCGCGCGC TGGCGCGCTT CCGGCTCGCC
GAGGTGGAGC GCGCCCGCGG CAACCTGCAG AAGGAGGCGG CCAGCCTGCA GCGGCTCGGC
TTCGTCGGGC GCTGGCGGGT GCTCGGGCCG TTCGACGACG AGGGCAAGCG CGGGCTGGCC
GAGGCGTTCC CGCCCGAGAA GGCCGTGGAC CTCGCCGCCC GGTACCCGGG CAAGGTGCGC
GAGGTGGCCT GGCGTGCGCT GCCGGAGGAC GCGGTGGTGG ACGGGTTCGT CCACCTGGGC
GCGGCGCTGC GCCCGGCCCG CGAGGTGGTG GCGTACGCGC TCGCCGAGGT CGAGGCGCCG
CGCGACCTCG ACGCCAGGCT CTGGCTGGGC GCGAGCGGGG CGGCGCGGAT CTGGGTGAAC
GGCGCGGTGG TGCTCACCGA CGCGGACTAC CACCCGGCCC GGCTCGACCA GCGCGGGGTC
GTGGTGACGC TCCGGCGCGG CGCGAACCGG ATCCTGGTGA AGCTCTGCCA CCAGGACGGC
CGCATGGGCT TCTACCTCCG GCTCGCCGAC GCGCGCGGCG AGGGGCTGGA GCTGGCGGCC
GCGGATCCGC GGGGCGCCGC GCTCCAGGAG GTCCCCGCGC CCGGGCCGGC GGCGCCGGTG
CCGCCCGCGG TGGCGGCGCT GGAGCAGCGG GTGAAGGCCG CCCGCGGCCC GCGCGCCGAG
GCGGAGGCCC GGCTCGAGCT GGCGCGGGTG CTGGCGGCGC GGCAGGGCGG GGACGTGCAG
GAGCGGCGGG CGGCGGCCGA GGCGCGCCGC GCGGCGCTGC TCGCGCCGGG CTGGGTGGAG
GCGCAGCTCG AGGCGGCGGC GCTGGAAGAG GACCACGGAC GCCGGCGGCA GCGCATCGAG
GCGGCGCTCG CGGTGGCGCC GGAGGATCCG CGGGCGCTGC GGGCGCTCGG GCAGGAGGAG
CTGGATCAGG GCCGCCCGCA GGCGGCGGCC CGGCTGCTCG AACGCGCGGT GCGGGCCGCG
CCGGGCTGGG CGGCGCCGCG CGTGGAGCTC GCCGAGGCGC TCTCCCGGGC CGGCCTGGAG
GCGCGCGGCG CGCTGCTCGC GGAGGCGACC GCGTCCGCGT TCGCCACGGT GCCCTCCGCG
GTGCGGGCCG CGGCGCGGTC GGCGCGGCGC CTGGGCCGCA CCGAGGAGGC GTCGGCGCGC
AGCCGCACGC TCGTCGCGCT CCGGTTCGAC GACGCGCAGA CGCGCGCCGC GCTGGCGCAG
ATCCTGGCAG ATCGCGGCGA CGTGGCCGGC GCGCGGGCGC TGCTCGAGGA GGCGCTGCGC
CTCGATCCCT CCGACGTGTA CCAGCGGCTG CGGCTCGGCG ACCTGCTCGC GGCGAGCGGG
CGCGGGGAGG AGGCGGAGCG CGCCTACGCC GCGGCGCTCG CCCTCGCGCC GGACGAGCCG
GACGCGTGGG AGCGGCGCGG CCGCGCGCGG CTCTCGCAGG GCCGGGTGAA GGACGCGCAG
GCCGACCTGC AGCGCGCGCT GGAGCTCCGG CCGCAGAGCC CGGAGCTGAA GCTCCTGGTG
CGGAGCCTCG AGCCGGCGCG CGAGCCGTTC GAGCGCCCCT ACCTGCTCGA CGCGCGCGCG
CTCGCCGCGG CCGCCCCGGC GCCCGAGCCG GACGAGGACG CGCTGGTGCT GGGCGAGCTG
AAGGTCACGC GGGTGCTGCC CTCGGGCCTC TCCTCCACCT ACACCCAGAC CGTGGTGAAG
GTGCTGACGC CCCGCGGGGC CGATCAGGCG CGCCGGCAGA CCGTGTCCTG GTCGCCGGAC
CGGCAGGAGG TGCGGGTGGA GCGCGCGCGC ATCCTGAAGC CGGACGGGAC CGTGATCGAG
GCGCACGACG AGTCCGAGCG GAGCGCGAGC GAGCCCTGGT ACCGGCTCTA CTACGACCTG
ACCGCGCGCA CGCTCTCGTT CCCGGCGCTC GCGCCCGGCG ACGTGCTGGA GGTGGCCTGG
CGGCTCGAGG ACGTGGCCGG GGAGAACCTG CTCTCCGACT ACTTCGGCGA TCTCACCTTC
GTGGACGACA CCACCCGCAA GGCGCGCTTC GAGTACGTGC TGCTCGTGCC GGCCGCGCGC
GCCATCCACG CGAACGCGCC CGCCGGGATC GCGCACGCGC AGCGCACGCT GCCCGGCGAG
GTGGTCGAGC ACCGCTGGTC CGCCCGGGAC CTGCCCCGCG TCGTGCCCGA GCCGGGCATG
CCGGGCTGGA GCGAGGTGTC GCGCCACGTC CACGTCTCCA CGTACGCGAG CTGGGACCAG
GTGGCCCGCT TCTACTGGGG GCTGGTGAAG GACGCGGTGC GCCCCACCCC GGAGGTGCGG
GCCGAGGCGG AGCGGATCGC GGCCGAGGTG CTGCGGGCGC GGCGCGGCGA GGGCACGCGC
GTGGCGCGCG CGCAGGCCGC GGCGAGCGCG CTGCCGCCGC CCGGCGGCTG GGACCTCGAG
ACGCAGCGCG CGCTCACCCG CGCCGTCTAC GACTTCGTGG TCTCGCAGAC CCGCTACGTG
GGCCTGGAGT TCGGCATCCA CGGCTACAAG CCGTACCGGG TGGACCAGGT GCTGCAGCGC
CGCTTCGGCG ACTGCAAGGA CAAGGCGAGC CTGCTGCGCG CCATGCTGGA GTCGATCGGG
ATCGACGCGC GCCTGGTGCT GCTGCGCATG CGCCGGCTCG GCCGGCTTCC CGAGGCGCCC
GCGTCGCTGG CGGTGTTCAA CCACGCCATC GTGTACGTGC CGGCGCTCGA CCTGTGGCTG
GACGGCACCG CCGCCTACTC CGGCTCCGGC GACCTGCCCG GCGAGGACCG CGGCGCCACC
GTGCTGGTGG TGAACCCGGA CGGCAAGCCG CGCTTCGCCA CCGTGCCGGA GGCGCTCCCC
GAGCAGAACC GCGGCGAGAC CCGCTTCGAC GTGGCGCTCG CCGCCGACGG CTCCGCGGCG
GTCCGCGGGG CCTGGCGCGT CACCGGCGCG GAGGCGCCCA CCTACCGCCG CGCCTACCTG
GTGGAGGAGC AGCGGCGCGC CCAGCTCGAG CAGAGCTTCA ACCGCAGCTT CCCCGGCGTG
CGCGTCGCCT CCGTGACCGC CTCCGACCTC ACCCGCCTGG AGGACGACGT CACCATGCAG
TTCGCGCTGG AGGTCCCCCG CTTCGCCCGG CCCGACGGCG CCGGCCTGCG CTTCTCGCCG
TTCGGCGCGG CGCGCGGCTG GGGCGAGAGC TGGGCCGCGC TCTCCTCGCG GCGGCACGAC
CTCGACCTGG GCAGCCCCAC CGAGACGGTG TTCACGTACC GTCACACCCT GCCCGCCGGC
TGGCGGATCG CCGAGCTGCC CGACGGCGAC GCGGCGAGGA CCCCCTACGC CAGCTTCGAG
GTCCGCTACC GCCGCGACGG CGCGGCGCTC GTGGCGGAGG CGCGCGTCCG GCTGGAGAAG
GGGCGCATCC CGGCCCGCGA CTACCCCGCC TTCCGCGAGC TGACCTCGCG CATCGACCGC
GCCTTCGCGC GCAAGGTGCG CATCGTCCCG GCCGAGGAGG CGGCGCGATG A
|
|---|
| Protein sequence | MLARLAALLA LCLASTGSAR ALSPLPPPTG LDPEAERAAA AVAALDRERR GPRGLAALAE
LDALADDLPE LAHLAAAYAR AADDREAHPE VRALARFRLA EVERARGNLQ KEAASLQRLG
FVGRWRVLGP FDDEGKRGLA EAFPPEKAVD LAARYPGKVR EVAWRALPED AVVDGFVHLG
AALRPAREVV AYALAEVEAP RDLDARLWLG ASGAARIWVN GAVVLTDADY HPARLDQRGV
VVTLRRGANR ILVKLCHQDG RMGFYLRLAD ARGEGLELAA ADPRGAALQE VPAPGPAAPV
PPAVAALEQR VKAARGPRAE AEARLELARV LAARQGGDVQ ERRAAAEARR AALLAPGWVE
AQLEAAALEE DHGRRRQRIE AALAVAPEDP RALRALGQEE LDQGRPQAAA RLLERAVRAA
PGWAAPRVEL AEALSRAGLE ARGALLAEAT ASAFATVPSA VRAAARSARR LGRTEEASAR
SRTLVALRFD DAQTRAALAQ ILADRGDVAG ARALLEEALR LDPSDVYQRL RLGDLLAASG
RGEEAERAYA AALALAPDEP DAWERRGRAR LSQGRVKDAQ ADLQRALELR PQSPELKLLV
RSLEPAREPF ERPYLLDARA LAAAAPAPEP DEDALVLGEL KVTRVLPSGL SSTYTQTVVK
VLTPRGADQA RRQTVSWSPD RQEVRVERAR ILKPDGTVIE AHDESERSAS EPWYRLYYDL
TARTLSFPAL APGDVLEVAW RLEDVAGENL LSDYFGDLTF VDDTTRKARF EYVLLVPAAR
AIHANAPAGI AHAQRTLPGE VVEHRWSARD LPRVVPEPGM PGWSEVSRHV HVSTYASWDQ
VARFYWGLVK DAVRPTPEVR AEAERIAAEV LRARRGEGTR VARAQAAASA LPPPGGWDLE
TQRALTRAVY DFVVSQTRYV GLEFGIHGYK PYRVDQVLQR RFGDCKDKAS LLRAMLESIG
IDARLVLLRM RRLGRLPEAP ASLAVFNHAI VYVPALDLWL DGTAAYSGSG DLPGEDRGAT
VLVVNPDGKP RFATVPEALP EQNRGETRFD VALAADGSAA VRGAWRVTGA EAPTYRRAYL
VEEQRRAQLE QSFNRSFPGV RVASVTASDL TRLEDDVTMQ FALEVPRFAR PDGAGLRFSP
FGAARGWGES WAALSSRRHD LDLGSPTETV FTYRHTLPAG WRIAELPDGD AARTPYASFE
VRYRRDGAAL VAEARVRLEK GRIPARDYPA FRELTSRIDR AFARKVRIVP AEEAAR
|
|---|
| |