Gene MADE_04084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_04084 
Symbol 
ID6776509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4395906 
End bp4396766 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content45% 
IMG OID642757535 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_002128368 
Protein GI196158879 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00162731 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGCG GTAAAGAAAT AAAAGGTAAG ATTGGGAGTA TCAAAAATAC TCAGAAGATT 
ACCAGTGCGA TGGAAATGGT TGCTGCGTCT AAGATGAAAA AGGCGCAGGA ACGTATGGCT
TCTGGCCGTC CATATGCACA AAATATGCTT AAAGTGATTG GTCACATTGC AAACGGTAAC
CTTGAATATC GCCATCCATA TTTGGAAGAG CGTGAAGTCA AGCGCGTCGG TTACATTGTG
ATTTCCACTG ACCGAGGCTT ATGTGGTGGT TTGAACACCA ACGAATTTAA GCTCGTCACC
CAAGACGTCA AAAAATGGCG GGAACAGGGT GTAGAAGTGG ATTTCGCTGC ATTAGGTTCT
AAAGCGTGCA GTTTCTTCAA CCGTTTTGGT GGCAAGTTGC TTGCTGCTGA ATCTGGTTTA
GGTGACAAGC CGTCTGTGAG CGATGTAGTA GGTGTTGTAC GCGTTATGCT TAAAGCGTAC
GACGAAGGAC AAATTGACCG AGTATTCTTG GTATTCAATG ACTTCGTTAA CACCATGACA
CAGAAACCTG TGATCAATCA GTTATTGCCT TTGCCAAAGT CAGAAGACGA AGAATATCAA
CATCGTTGGG ACTACATCTA CGAGCCAGAT CCAAAAGAAA TTTTGGAAGC ACTAATGGTT
CGTTACATTG AGTCTCAGGT GTATCAGGGT GTTGTAGAAA ACGCGGCGTC AGAGCAAGCT
GCGCGAATGG TTGCCATGAA GGCAGCAACC GACAACGCCG GTAACCTTAT TGATGAGTTA
CAACTGGTAT ATAACAAAGC GCGTCAGGCT GCAATCACAC AAGAAATCAG TGAGATTGTT
AGCGGTGCCG CAGCGGTGTA G
 
Protein sequence
MASGKEIKGK IGSIKNTQKI TSAMEMVAAS KMKKAQERMA SGRPYAQNML KVIGHIANGN 
LEYRHPYLEE REVKRVGYIV ISTDRGLCGG LNTNEFKLVT QDVKKWREQG VEVDFAALGS
KACSFFNRFG GKLLAAESGL GDKPSVSDVV GVVRVMLKAY DEGQIDRVFL VFNDFVNTMT
QKPVINQLLP LPKSEDEEYQ HRWDYIYEPD PKEILEALMV RYIESQVYQG VVENAASEQA
ARMVAMKAAT DNAGNLIDEL QLVYNKARQA AITQEISEIV SGAAAV