Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_04069 |
Symbol | |
ID | 6776553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 4382740 |
End bp | 4384014 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642757520 |
Product | HipA domain protein |
Protein accession | YP_002128353 |
Protein GI | 196158864 |
COG category | [R] General function prediction only |
COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGCAGA ATCGGCAAGG CGTTTTTTTT CAGTATGCAG ACAGCTATTT GCAGCAGTTT GGCAACTTAT CTCCTTTTAC CTTGCATGCG AACGCGCAAG TTCAAGTCGC ACCTAAGCAG CCACACCAAG GTGTACATGG CGTATTTGGA GATTGTTTGC CCGATGGCTG GGGCATGCTG TTACAAGATC GTATTTTCCG GCAACAGGGC ATCCTGCCTA ATCAATTAAC GGCGATGGAT AGACTGGCCT TTGTCGGTGA TAAAGGCATG GGAGCATTGT CTTTTTCACC GGTGTCTGAG TTTTCAGCCA CCACGCACGT GGATATTGAT TTAGCGACGT TAGGCTTAGA AGCACAAACG TTGTTCGATT CTTCGATGTC AGATTATATG GTTGATAATC ACGATGAGTT AGATGGGCAT ACACAACAGG TATTGGCCGC ATTAGTCGCC GGAGGTAGTT CGGGTGGGGC AAGACCTAAG GCACAAATTT ATATGCCTGC TGGGGAAACT CAGCATTGTC GAACCTTCGC TCAGCCTGGA GATGAGGCTT GGCTGGTGAA GTTTACCTCT AAAAATCTCG CACTTGGCCA TGAAGAAGGT TTGTGTGAGG CGGTTTATTT ACAAATGGCA GAACTTGCTA AGTGTCAACC GCCGCAATGG CAACTCATTG AAGCACCACC TACAAGCGGT GCGTCTGCTT GGTTGGCGCT TAAGCGTTTT GATTATGTCA CTGAACAGGC CGACTTAGGC AGAAAGCGCA GTTCAGGTCG ATTGCATATG CACAGCGCTT GCGGGCTGCT GGATGCAGAC TTTCGAACGC CAAGTTTAGA TTACATTGAT TTAATTAAAG CCAGCCGTCA GTTGTGTAAA TCGCCAGCGG CTGGACAGCT GCAATTTCGC CGCGCCATTT TTAATCTGCT GTCGTCTAAT CAAGACGACC ACAGTAAAAA CTGGGCGTTT TTGCAAGCGG ATGACGGTCA ATGGAATCCT GCACCTTTTT ACGATGTGAC TTACAGCCCA CATCCATTCA ACGAACACGC CACTGCTTTC GGCGGTTATG GCAAAGCGCC ATCGCTTAAG GTGATGCAAA AACTTGCTAC TAGTGCTGGC TTTGCGAATT GGAATGATGC AAAGCAAGTT ATTGAAGAAG TCGCAGAAGC CATCAGCCAA TTTACGTATC TTGCCAAGCA ACAAGGGATC AGTAAAACAA CAATGTCCGT GATTGCTAAG ACATTGGAGC AGCGTAAACA AGAAAATGCA GCGCTTTTTC TATAA
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Protein sequence | MAQNRQGVFF QYADSYLQQF GNLSPFTLHA NAQVQVAPKQ PHQGVHGVFG DCLPDGWGML LQDRIFRQQG ILPNQLTAMD RLAFVGDKGM GALSFSPVSE FSATTHVDID LATLGLEAQT LFDSSMSDYM VDNHDELDGH TQQVLAALVA GGSSGGARPK AQIYMPAGET QHCRTFAQPG DEAWLVKFTS KNLALGHEEG LCEAVYLQMA ELAKCQPPQW QLIEAPPTSG ASAWLALKRF DYVTEQADLG RKRSSGRLHM HSACGLLDAD FRTPSLDYID LIKASRQLCK SPAAGQLQFR RAIFNLLSSN QDDHSKNWAF LQADDGQWNP APFYDVTYSP HPFNEHATAF GGYGKAPSLK VMQKLATSAG FANWNDAKQV IEEVAEAISQ FTYLAKQQGI SKTTMSVIAK TLEQRKQENA ALFL
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