Gene MADE_04065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_04065 
Symbol 
ID6776562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4378906 
End bp4379148 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content54% 
IMG OID642757516 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_002128349 
Protein GI196158860 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCAA CTACACAATC ATCCACCACA TCAACACACC CAGCGCGTCA GCAGCGGATT 
TTGCGCTTGC CCGAGGTAAA GGCCAAAACG GGCTTTGGCC GCAGTACCAT TTATGCCCTG
ATGGCCAATG GTGAATTTCC GCGATCCATT CGTATTGGTG CGCGTGCCGT GGGCTGGTTA
GAAAGCGATA TCGACCAGTG GATTGAAACC CGCCGTATCG GTGCTGCTTA TGGCCGTGGA
TAA
 
Protein sequence
MNPTTQSSTT STHPARQQRI LRLPEVKAKT GFGRSTIYAL MANGEFPRSI RIGARAVGWL 
ESDIDQWIET RRIGAAYGRG