Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_04061 |
Symbol | |
ID | 6776575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 4372176 |
End bp | 4374287 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642757512 |
Product | type I restriction-modification system methyltransferase subunit |
Protein accession | YP_002128345 |
Protein GI | 196158856 |
COG category | [V] Defense mechanisms |
COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCACCG CCCAGCAATT AGGTGCGATT GTTAAATCGT CTCGGCAAAT CATGCGTAAA GATAAAGGCT TAAATGGCGA TCTCGACCGC CTGCCAATGC TCACTTGGAT CATGTTTTTG AAGTTTCTCG ACGACTTAGA ACAAATGCGA GAAACCGAAG CCGTGCTAGA AGGAAAAAGC TTTCAGCCAG CTATCGAAGC GCCATACCGC TGGCGAGATT GGGCAGCAAT TGAAGGTGGT ATCACCGGCG ACGAGCTGAT TGCCTTTATT AACAACGACG AAGCAATGCG ACCTGATGGT ACCCGTGGCA TCGGTTTGTT TGCCTACTTG CGTAGCCTGC AAGGTGACAA CGGCGGTGAT CGCAGAGATG TGATTGCGAC CGTGTTTAAA GGCATGCAAA ACCGCATGAT CAACGGGTAT TTGTTACGTG ATGTCGTCGA CAAAATAAAC GGCATTCATT TCAACTCATC TGAAGAGATG CATACCTTAA GCCGCTTATA CGAAACCATG CTGCGTGAAA TGCGTGATGC CGCTGGTGAC TCCGGCGAGT TTTATACTCC GCGTCCAGTG GTTCGCTTTA TGGTTGAGGT GATGGATCCG CAGTTGGGTG AGTCCGTATT GGACCCAGCC TGCGGCACGG GTGGTTTTTT GGTTGAAGCG TTCGAACACC TAGAGCGCCA GTGTAAAACA GTCGAAGACC GCGAAGTATT GCAAGAAAGC AGTATCTTTG GCGGTGAAGC CAAATCGTTG CCTTACCTGT TGGTACAAAT GAACCTGTTA CTGCATGGTT TGGAGTACCC AAGAATTGAC CCAGAAAATA GCCTGCGTTT TCCACTACGA GAGATGGGTG ACAAAGATCG TGTGGATGTG ATTCTAAGCA ACCCCCCTTT TGGTGGTGAG GAAGAAAAAG GCATTCTTGG TAACTTCCCA GAAGACATGC AAACCGCCGA AACTGTTCAG CTTTTCCTAC AGCTTATAAT GCGAAAACTT AAGCGGAAAG GTAATGGATC AGTAACCGGA GGTCGTGCTG CAGTTGTTGT TCCAGAAAGC GTCTTGTATG ACGGGGGAGT TGCTCAGCGA GTACGAAAGC AACTACTCAG TGACTTCAAT CTTCACACTA TTATTCGTTT GCCTAAGGGT GTATTTGAGC CATATTCTGA TATCCAATCA AACATACTTT TTTTTGATAG GAACGGCCCA ACAAAAGGTG TTTGGTTTTA TCAGCACGAG GTACCGGTTG AGCGTCGGGG GATGAAAAAT CCCTGCTACA CGGTAACAAA TGCTTTGAAA GAAGAAGAGA TGGCAGAAAT ACGGACTTGG TACGAAAGTC CCTGCGAAAG TGAATACGCT TGGTTTGTTC CGTCCGAAGA CATTAGGAGT AAAGATTTTT CCTTTGATTT TCGAAATCCA CGTAAGGAGC AACAAGAGTT AAAAGATCCC GAGCATTTGC AACAAGCTTT ATCGAGTTAT CTCTCAAGAA TTGAAAACAG CAATGCTAAT TTTCAATCTG AATCTCATAC GATAAGGAAT ATAGATAAAA AGTCATGGAA TGAATTTAAG ATCGGTGATT TTTTAATTCG CTCTAAAAAT AGTATCGAGT TAGAGGATGA TGTTGATTAC AAACAAATAA CAGTAAAGTT GTATGGGAAA GGTGCGGTTC TGAGAAAGAC TATTCTTGGT AAGGATATTA AAACAAAATC CCAGTTCCTA GCTCAAAGTG GTCAGCTGAT TATGAGCCGA ATAGACGCAA GAAATGGGGC TTTTGCTATT GTACCGTATG ATTTAGATGG TGCTGTTGTT ACCCAAGATT TTCCATTATT CGATATCAAT AGGGATGTCA TATTGCCTGA GTTCTTGGCC TTTTTACTTC GCTCCAAAGA GTTTACCTAT GCTTGCCAGC ATGCAAGTAA AGGGACAACC AATAGAAAAA GATTGAAAGA GGAGCTTTTT TTGAGTGAAG TTTTATTCCT TCCATCAATC TCGGAGCAGA AGGTTATAGT GGCCTACAAT AGAGAACTTA ATAAACTTGC CAATTTGGTG CGTGAATTTT CTGACTGTTG TGATGAATCA ACAACACAGT TGGCAGATTA CTTTTTTAAT ACGAACAATT AA
|
Protein sequence | MTTAQQLGAI VKSSRQIMRK DKGLNGDLDR LPMLTWIMFL KFLDDLEQMR ETEAVLEGKS FQPAIEAPYR WRDWAAIEGG ITGDELIAFI NNDEAMRPDG TRGIGLFAYL RSLQGDNGGD RRDVIATVFK GMQNRMINGY LLRDVVDKIN GIHFNSSEEM HTLSRLYETM LREMRDAAGD SGEFYTPRPV VRFMVEVMDP QLGESVLDPA CGTGGFLVEA FEHLERQCKT VEDREVLQES SIFGGEAKSL PYLLVQMNLL LHGLEYPRID PENSLRFPLR EMGDKDRVDV ILSNPPFGGE EEKGILGNFP EDMQTAETVQ LFLQLIMRKL KRKGNGSVTG GRAAVVVPES VLYDGGVAQR VRKQLLSDFN LHTIIRLPKG VFEPYSDIQS NILFFDRNGP TKGVWFYQHE VPVERRGMKN PCYTVTNALK EEEMAEIRTW YESPCESEYA WFVPSEDIRS KDFSFDFRNP RKEQQELKDP EHLQQALSSY LSRIENSNAN FQSESHTIRN IDKKSWNEFK IGDFLIRSKN SIELEDDVDY KQITVKLYGK GAVLRKTILG KDIKTKSQFL AQSGQLIMSR IDARNGAFAI VPYDLDGAVV TQDFPLFDIN RDVILPEFLA FLLRSKEFTY ACQHASKGTT NRKRLKEELF LSEVLFLPSI SEQKVIVAYN RELNKLANLV REFSDCCDES TTQLADYFFN TNN
|
| |