Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_04059 |
Symbol | |
ID | 6775127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 4368106 |
End bp | 4371363 |
Gene Length | 3258 bp |
Protein Length | 1085 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642757510 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_002128343 |
Protein GI | 196158854 |
COG category | [R] General function prediction only |
COG ID | [COG1204] Superfamily II helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTTT CACAAGAGCA CTTACTACAG GTAGATCAGC ATTGGGCTGT TCAGTCCATT AGCGCTGAAT TGCGTGATAC GGCTATGGAA ATGGCGGAAC GACGCTTGGT TGATGTGGCG CTGGGTAATC TACTTGAATA TGCGGAAACT GAGTTTGACA GTGACTTGTT AGAGCAAGTA GCAACGGCGT ATGAGTTAGC CGCGATCGAA GGCATTGGCG CTTTGTTGCA CCCTGTTGCC AATCAGGACA ATAAAAATAT TCGAGAGCTT GCACAAGCTG GCGCGTTTCG AGCGTTCGGG CTTTATCGTG TATTACCCGT ACCGAGTGAC AATGAGGCGC GCTTGTTTCA TGTTTTGCAT GTGTCGGGTT TGGCCTACTG CGCCGATCGC TGGACCGATT TACGTCGATG GTTTGAAGAG CAGAACAGTA CAGTAGCAGT ACCCAGTGTG GCTGATGTTA CTTGGGATAA GCGTCTGCTA TACCGAATTT TTGATTGTTG GTTGCGACTG CTTCGCAAAA ACCGCTGGGA TGACTTAGAT CAGATTTCAG AGATTGTGCT TGGCTTACGA AACGATCAAG CAAACTACGA AAAAGCGTTA CTAGAACAAA CCCAAGGTGC AGAGGCGCAA AGCGTCGCCA TGCGTTTAGT GGCGCTTTAT CATTGGGCCA AAGCAACAGA GCGTTTAGCT GTGTACATGC TGCAAGGCGA ACCGGTAGCG ATAGATGCGC AATTAGATCA GCATTTTGAA GCGGCGCAAA AAGCGGCACA AGCCTCTAAA GACCCGCAGC TCGAAATGAT TTTACGCTGG TTACATGTCG CAAGCCGAAA AATGGTTGCT GGGTCTTTAT GGTGGGTGGC GCATACGGTT AACTCCCGTG TGACACGCTT TGTTTCCCAT GTGACTAAAC ACAAGAGCTT ATTTGAACTG TTACCGCCGC AACGAGCGGC ACTGCAAGAG CAAGGTTTAC TCGACCAAGC TAGCAGAGCG GTAATTGTTG ATTTGCCTAC ATCCGGTGGT AAAACAGCGC TGGCACAGTT CCGCATGTTG CAAGCGCTGA ATCAGTTTGA TCAGGATGAT GGTTGGGTGG CCTATGTTGC GCCAACTCGC GCTTTGGTTT CGCAAATTAC CCGACGATTA CGTGAAGATT TTGGCCCATT AGGTATTCAA GTTGAGCCGT TAACTGGCGC GATTGAAGTC GATGCTTTTG AAGAAGCGCT TTTGGGTGAA GCACGTGCTT TTCAGGTTTT GGTTGCAACA CCTGAGAAAC TTCAATTGGT GATGAGAAAC AAAAAAGTTG CTCGCCCATT GGCTCTGGTT GTGATGGATG AAGCTCACAA TATTGAAGAT GAGTCTCGTG GCTTACGCAT TGAACTTCTG CTTGCAACGA TTAAGCAAGA ATCACCTCGG GCAAACTTCT TACTATTGAT GCCATTTGTT CCGAATGCTA ACGATTTAGC TCAATGGCTC GCTGCTGATC GTGGCCGAAG CATCAGCTTG GGCACCTCTG CTTGGCAACC GAATGAGAGA ATTGTTGGTC TATTTGATAT TCATAAAGGT GAAAAACGTG GTGATTGGAA TTTAAGTTTT GAAACGTTGA CGACCACTCA ACGTACGATT CACCTTAAAG GAATCCACAA TGTAGATGGT AACCGCCCTC TGCAAAAACT GACGTACTCT AGCGCTAAAG GGCTCGCAAC ACAGGCTGTT GCTATGGCTA AAGTGTTTTC TAAGCGCGGT ACCAGTATTG CTGTAGCGCA GACGATTCCA GATGCTTGGA GTATTGCTCG TAAAGTTGCC GCAGAGCTTG AACCTTTTGA GCAGGCGCAC GAAGACATTA AACTGGTTCA ACGTTTTCTT GCGGCTGAGA TTAGTGAGGA CTTTGAGCTA ATTGATATGC TGTCAAAAGG TGTTGTTGTG CATCATGCAG GCTTACCCGC TGAGGCGCTT TCATTAATCG AGTGGCTGAC AGAAGCTGGC CGTATTCGAG TGATGTGTGC AACGACAACC ATTGCACAAG GGCTTAACTT CCCTGTTTCA TCTGTTTTTC TTGCGACGAG AAAATTGCCG TCTAGCAAAC CACCTTATGA TAATGAAATG TCACATCGGG CATTTTGGAA CCTCGCGGGG CGAGCTGGGC GTATCGGCCA TGATAGCGTA GGCGTAATCG GTATTGCTGC GGGCAAAGAG CCGAATGAGG TAAGAAAGTA TGTTAGTGAT GCAACCGCAT CGTTAGTTTC CCGTTTGGAA GGGATGCTGG ATGATCTTCA AACTGCGGGG AAATTAGCAG ACTTATCTTG GGTTATGCAG CAAGAACAAT GGGCAGACTT CAGAAGCTAT ATCGCTCATT TATGGAATGA AAAACGTAAC TTGGACGCTG TAATTGGTGA AGCAGAACAA TTACTGCGAA ATACCTACGG GTTTGGTTCT CTTCGCGCTA AAGCTGATAA AGCCTCGCAA GAGAAAGCTG ATGCGCTTCT TGAGGCTACC AAAGGATATG TTAGAAAGTT AGCTGAGCAT CCAGAAAATG CTTCTCTTGC TGATGTTACA GGCTTCTCTC CTGAGGGTGT TCGTTCAACT TTATTGGATT TGAATAACCT TGAAAACAAG TTAACGCTTG CAGATTGGGA GCCTTCGAGT CTATTTGGCG ATAAATCGAA GTCTGTGCTG CCAAGCTTGA TGGGGATTAT GCTGCGGGTT CCGCAGTTAC AAGAAAGTTT ACGAGAGATC AGTAAAGGAC AAGGGAATAG TCATCGTAAA CTTGCTGATA TTACCCAGGC TTGGGTAACA GGTAGCTCCA TTGAATCTAT AGCGAAGACT TACTTTGAAG GTGATAGCCT TACGGATCAA ATATCTAAAG CTTGCAGAGC TGTTTATAGA GATTTGGCCA ATAATGGCGC TTGGGGGTTG TCGGCATTAA GCAAAATGCC AACTTCAGGG CTTGATTTTG AAGCCATGAC AGACGAAGAA AAGCGCAGAT TAAATAACCT CCCAGCGATG CTTTACCATG GCGTGAAAAC CGAAGAAGGC GTGTTGATGC GCATGAACAA CGTTCCACGA AGCATTGCTG AACGTGCCGG TGAAGACTTT AAGGCTCGAA CTGAAGCCGG TGCAGAAAAT ACTCTGTCAC CTCGAAAAGC CAGCGAATAT CTGAAGTCTT TGAAACCGGA TGATTGGGCG CGTTTGAAAC CTGATAATTC CTCGCTGTCC GGCGAAGACT ATTTGAAAGT ATGGAAGCGG CTTTCAGGTG AAGCTTAA
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Protein sequence | MTLSQEHLLQ VDQHWAVQSI SAELRDTAME MAERRLVDVA LGNLLEYAET EFDSDLLEQV ATAYELAAIE GIGALLHPVA NQDNKNIREL AQAGAFRAFG LYRVLPVPSD NEARLFHVLH VSGLAYCADR WTDLRRWFEE QNSTVAVPSV ADVTWDKRLL YRIFDCWLRL LRKNRWDDLD QISEIVLGLR NDQANYEKAL LEQTQGAEAQ SVAMRLVALY HWAKATERLA VYMLQGEPVA IDAQLDQHFE AAQKAAQASK DPQLEMILRW LHVASRKMVA GSLWWVAHTV NSRVTRFVSH VTKHKSLFEL LPPQRAALQE QGLLDQASRA VIVDLPTSGG KTALAQFRML QALNQFDQDD GWVAYVAPTR ALVSQITRRL REDFGPLGIQ VEPLTGAIEV DAFEEALLGE ARAFQVLVAT PEKLQLVMRN KKVARPLALV VMDEAHNIED ESRGLRIELL LATIKQESPR ANFLLLMPFV PNANDLAQWL AADRGRSISL GTSAWQPNER IVGLFDIHKG EKRGDWNLSF ETLTTTQRTI HLKGIHNVDG NRPLQKLTYS SAKGLATQAV AMAKVFSKRG TSIAVAQTIP DAWSIARKVA AELEPFEQAH EDIKLVQRFL AAEISEDFEL IDMLSKGVVV HHAGLPAEAL SLIEWLTEAG RIRVMCATTT IAQGLNFPVS SVFLATRKLP SSKPPYDNEM SHRAFWNLAG RAGRIGHDSV GVIGIAAGKE PNEVRKYVSD ATASLVSRLE GMLDDLQTAG KLADLSWVMQ QEQWADFRSY IAHLWNEKRN LDAVIGEAEQ LLRNTYGFGS LRAKADKASQ EKADALLEAT KGYVRKLAEH PENASLADVT GFSPEGVRST LLDLNNLENK LTLADWEPSS LFGDKSKSVL PSLMGIMLRV PQLQESLREI SKGQGNSHRK LADITQAWVT GSSIESIAKT YFEGDSLTDQ ISKACRAVYR DLANNGAWGL SALSKMPTSG LDFEAMTDEE KRRLNNLPAM LYHGVKTEEG VLMRMNNVPR SIAERAGEDF KARTEAGAEN TLSPRKASEY LKSLKPDDWA RLKPDNSSLS GEDYLKVWKR LSGEA
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