| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_04016 |
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| Symbol | |
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| ID | 6778938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4324525 |
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| End bp | 4326072 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642757467 |
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| Product | threonine dehydratase |
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| Protein accession | YP_002128300 |
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| Protein GI | 196158811 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAG AGCACGTTAG CGATCACGAG TATCTAAAAA AGATATTGCT CGCTCCCGTT
TACGATGTGG CGGTGGCCAG TGAGCTTTCT TATATGTCTT TGCTTTCAGC TGAGCTTGGC
AACGAGATTT TTTTGAAACG AGAAGACCAG CAGCCGGTTA AAAGCTTTAA ACTGCGTGGT
GCCTACAACC GTATTTGTTC ATTAAGTGAA GCTCAGCTTA AAGCCGGGGT TATTGGTGCT
TCTGCCGGTA ACCATGCGCA AGGCTTGGCG TATAGCGCAA AAATGAAGGG TATTCAGGCA
ACCATCGTTA TGCCGGAAAC CACCCCTGAC ATTAAAGTAG ACGCAGTACG TCGCTTTGGT
GGTGAAAACG TGAATGTGGT ATTGCACGGT ACTAGCTTTG ACCAAGCCAG TAACCATGCT
AAAGCACTGT GTGAGACCCA TGGCTATACC TTCGTACCGC CGTTTGACGA CCCTGATGTA
ATTGCAGGCC AAGGTACGGT TGCGCGAGAG TTATTAGAGC AAAACCCACA CCTTGATATT
TTATTTATCG CCGTGGGCGG TGGTGGCTTA GCTGCCGGGA TTGCCGTGTA TTTAAAGCAG
CTAAAGCCCA GCATTAAAAT TGTGGCGGTG GAGTCTGAAG AGTCGGCGTG TTTCATTAAA
GCGAAAGCAC AAGGCGAGCC TACGGAACTG GAAAGCGTCG GTATATTTGC CGATGGCGTG
GCTGTCAAAG TCATGGGGCA GGAAACCTTC CGTTTATGTA ACCGTTTAAT TGACGAAACC
ATTACCGTTA CCAATGATGA AATTTGTGGC GCAATTAAAG ATATTTTCGA CGACACCCGG
GTTATTGCTG AACCTGCTGG CGCCCTTTCT GTGGCCGCTA TTCGCAAATA CGCTAAGCAG
TACGACTTGA AGGGCAAGAA GCTTGGTGGC ATTTTATGTG GCGCAAACAT CAATTTTCAT
ACCTTACGCT ATGTTTCTGA ACGCTGTGAA TTAGGCGAGC AGAAAGAAGC AGTTTTTGCG
GTAAAAATTC CTGAAACCAA AGGCGCTTTC AAGCAGTTTT GTGAGTGCGT GGGGGCTAAG
GCCATTACCG AGTTCAATTA TCGCTATGCC AGTGAAAGTG AAGCGCATAT CTTTGTAGGC
GTGAAGCTTA AAGGCGGTCA GCAAGAGTTT GCTGCACTGC AAGGTGACCT TGAGAGCAAA
GGCTATGACT GCGTTAATTT AAGTGACAAC GAGCTGGCAA AACTGCACGT ACGTCATATG
GTTGGTGGTC GCCCACCTAC TATCTTGAAC GAGCAGGTAT TTAGCTTTGA ATTTCCGGAG
CGCCCGGGAG CATTGCTGAA TTTCTTAAAC ACCTTAGGCG AGCAGTGGAA TATTACTTTA
TTCCATTATC GCAACCACGG TGCAGCCGAG GGGCTAGTGT TAGCTGGTTT TGATATTGCG
CCTGAAAGCC GGGATGACTT TAACCAGCAC GTCGCCGAAT TAGGTTACAA GGTGGAAGAA
GTCACGGATA ATCCAGCTTA TCGTTTTTTC TTGTCTCAAC CCGCCTAA
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| Protein sequence | MEKEHVSDHE YLKKILLAPV YDVAVASELS YMSLLSAELG NEIFLKREDQ QPVKSFKLRG
AYNRICSLSE AQLKAGVIGA SAGNHAQGLA YSAKMKGIQA TIVMPETTPD IKVDAVRRFG
GENVNVVLHG TSFDQASNHA KALCETHGYT FVPPFDDPDV IAGQGTVARE LLEQNPHLDI
LFIAVGGGGL AAGIAVYLKQ LKPSIKIVAV ESEESACFIK AKAQGEPTEL ESVGIFADGV
AVKVMGQETF RLCNRLIDET ITVTNDEICG AIKDIFDDTR VIAEPAGALS VAAIRKYAKQ
YDLKGKKLGG ILCGANINFH TLRYVSERCE LGEQKEAVFA VKIPETKGAF KQFCECVGAK
AITEFNYRYA SESEAHIFVG VKLKGGQQEF AALQGDLESK GYDCVNLSDN ELAKLHVRHM
VGGRPPTILN EQVFSFEFPE RPGALLNFLN TLGEQWNITL FHYRNHGAAE GLVLAGFDIA
PESRDDFNQH VAELGYKVEE VTDNPAYRFF LSQPA
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