Gene MADE_04014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_04014 
Symbol 
ID6778632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4320898 
End bp4321524 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content46% 
IMG OID642757465 
ProductLexA repressor 
Protein accessionYP_002128298 
Protein GI196158809 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCCAC TCACAGCTCG ACAAACTGAA GTTTTAGAAC TTATTAAAAC AACCATGCAA 
GAAACGGGAA TGCCGCCTAC GCGTGCTGAA ATTGCCCGTC AGCTTGGTTT CCGTTCTGCC
AACGCCGCGG AAGAACACTT GAAAGCCTTG GCGCGTAAAG GCGTGATTGA AATTTTGCCG
GGTACGTCGC GAGGTATAAA GCTCAATATT CCTCTGGACA ATGAAGCTGA AGAGGAAGAA
GGCCTGCCTT TAATTGGGCG TGTAGCTGCT GGAGAGCCTA TTTTAGCTCA AGAGCACGTT
GAGTCTCATT ACAAGGTAGA CCCAGCCCTA TTCCAACCTC AAGCAGACTT TTTACTTCGT
GTAAACGGTA TGAGTATGAA AGACATTGGC ATTTTAGACG GTGATCTGCT AGCTGTGCAT
CGCACGACTG ATGTACATAA TGGACAAGTG GTGGTAGCTC GAGTTGATGA AGATGTTACT
GTGAAGCGTC TAGAAAAACG CGGTCGCGAG GTATTACTTC ATGCTGAAAA TGAAGAGTTT
TCACCGATAA AAGTTGACCT TGCAAATGAG CCCTTCGCAA TCGAAGGTAT TGCAGTAGGC
GTTATACGAA ACGCTGATTG GATGTAA
 
Protein sequence
MRPLTARQTE VLELIKTTMQ ETGMPPTRAE IARQLGFRSA NAAEEHLKAL ARKGVIEILP 
GTSRGIKLNI PLDNEAEEEE GLPLIGRVAA GEPILAQEHV ESHYKVDPAL FQPQADFLLR
VNGMSMKDIG ILDGDLLAVH RTTDVHNGQV VVARVDEDVT VKRLEKRGRE VLLHAENEEF
SPIKVDLANE PFAIEGIAVG VIRNADWM