| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_04013 |
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| Symbol | |
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| ID | 6775394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4319151 |
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| End bp | 4320314 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642757464 |
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| Product | Cytochrome c oxidase, subunit II |
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| Protein accession | YP_002128297 |
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| Protein GI | 196158808 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.94805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAC TAACGACCGT ATTGGCAAGG TGGTGCGCAA GCCTACCATT TTTGCTTTTC
TCTTCATTGA TTTTCGCGCA AGAAGCAAGT GAAGAAATCT CTTCACTTAA TTTACGACGC
GGTGCTACCG ACATTAGTGG TCAGGTTTAC GACCTCCATA TGTTGATGTT CTTCATTTGT
GTTGGCATTG CGGTGGTCGT GTTTGGCGTG ATGTTCGCGT CTATGTATCT ACATAGAAAG
TCTCGTGGCG CTAAGCCCGC TAACTTTCAT GAAAATGTAA AAGTAGAAAT CGCGTGGACC
GTTATCCCTT TCCTTATTCT CGTTTTTATG GCGGTACCGG CTGCAAATAC GCTAATCGCG
ATGGAAGATA CCACTGAACC CGATATGACA GTGTTGGTCA CAGGGTCGCA ATGGAAGTGG
CATTATAAAT ATATGGACAG TGACGTGGAG TTCTACTCGC TTCTTGCCAC ACAAAGAGAG
CAGATTGAAA ACAAGTTTCA GAAAACCGAT AACTACTTAC TTGAGGTTGA CCGTCCACTA
GTGATACCTA CGGGCAAAAA AATACGATTT CTTATTACCT CTGACGACGT TATTCATTCG
TGGTGGGTTC CAGATTTTGC CGTTAAGAAA GATGCCAACC CTGGATTTAT TAACGAGTCA
TGGGCCAATG TAAATGAGCC CGGCATTTAT CGCGGACAGT GTGCTGAATT GTGCGGAAAA
GATCACGGTT ATATGCCCGT TGTGGTTATT GCCAAAGAGC CCGCTGAGTT TGATAAGTGG
ATGAGTGAAC AAGAAGCAAT GGTTCGTCAG GCAAAAGAAG AGGAGCAGCG TCTCCTTTCT
ATGAATATGT CGATGGACGA GTTAATGCAA GAAGGTGAGC GTGTTTATAA CGCGACTTGC
GCAGCATGTC ACATGCCAAA CGGTGAAGGT CTCCCTGGCG TGTTTCCAGC ACTCAAAGGC
AGCAAAATGG CCAAAGAAGA TCAGCAAGGC CATATCGACA TTGTGCTTCA CGGTAAGTCA
GGCACGGCCA TGCAAGCCTT TGGCAAAATG TTAAGTCTTA AAGAAATAGC AGCTGTTGTT
ACCTACGAGC GAAATGCGTG GGGTAACAAC ACCGGTGACA TGGTTCAGGC TAAAGATGTC
AACGCTGTTG CGAACGGAAA CTAG
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| Protein sequence | MKQLTTVLAR WCASLPFLLF SSLIFAQEAS EEISSLNLRR GATDISGQVY DLHMLMFFIC
VGIAVVVFGV MFASMYLHRK SRGAKPANFH ENVKVEIAWT VIPFLILVFM AVPAANTLIA
MEDTTEPDMT VLVTGSQWKW HYKYMDSDVE FYSLLATQRE QIENKFQKTD NYLLEVDRPL
VIPTGKKIRF LITSDDVIHS WWVPDFAVKK DANPGFINES WANVNEPGIY RGQCAELCGK
DHGYMPVVVI AKEPAEFDKW MSEQEAMVRQ AKEEEQRLLS MNMSMDELMQ EGERVYNATC
AACHMPNGEG LPGVFPALKG SKMAKEDQQG HIDIVLHGKS GTAMQAFGKM LSLKEIAAVV
TYERNAWGNN TGDMVQAKDV NAVANGN
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