| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_04012 |
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| Symbol | |
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| ID | 6778620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4317528 |
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| End bp | 4319141 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642757463 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_002128296 |
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| Protein GI | 196158807 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG CAACTGAAGT TATTTCGCCA GATACCTCTG CGCAACACGA TGATCATGAG
CATCACGACC ATATTCCAAA GGGGGTTACC CGTTGGTTGT TTACCACTAA CCACAAGGAC
ATAGGCACAC TCTATCTATG GTTCGCCTTT ATCATGTTCT TAGTGGGCGG TGCGATGGCA
ATGGTTATCC GGGCTGAACT GTTTCAGCCT GGCTTACAAA TTGTTGAACC AAATTTCTTT
AACCAAATGA CCACAGTGCA TGGGCTTATC ATGGTTTTTG GCGCGGTAAT GCCTGCTTTT
ACCGGGCTTG CTAACTGGTT AATCCCCATG ATGATAGGTG CGCCAGATAT GGCATTGCCT
CGCATGAATA ACTGGAGTTT CTGGATCCTG CCCGGCGCGT TTCTCATACT GTTGAGCTCG
CTGTTCATGG AAGGCGGTGG CCCAGCATTT GGCTGGACGT TCTATGCGCC ACTTTCCACA
ACATATAGCG GCGATTCTAC AGCGCTGTTT GTGTTTTCGG TTCACATAAT GGGCATTTCA
TCCATTATGG GGGCGATTAA CGTTATTGTG ACGATTTTCA ATATGCGTGC CCCTGGCATG
ACCTGGATGA AAATGCCGCT ATTTGTGTGG ACATGGCTAA TCACTGCATT CCTTCTTATT
GCCGTTATGC CAGTGCTAGC AGGCGCGGTA ACCATGGTAT TGACCGATAA ATTCTTTGGA
ACAAGCTTCT TTGATGCAGC AGGTGGCGGT GACCCCGTCA TGTTCCAGCA CATTTTTTGG
TTCTTCGGTC ACCCTGAAGT GTACATAATG ATATTGCCGG CCTTTGGTAT TATCTCGCAA
ATTGTTCCTA CTTTTTCCCG TAAAAAGCTA TTTGGTTATG CTTCTATGGT TTATGCAACC
GCGTCCATTG CGCTGTTGTC ATTTGTCGTT TGGGCTCACC ACATGTTTAC CACGGGCATG
CCAGTTTATA TGGAAATGTT TTTCATGTTT GCCACCATGC TGATTTCGGT GCCAACTGGC
GTAAAAGTGT TTAACTGGGT GGCCACTATG TGGCGTGGCT CGCTAAGTTT TGAAATGCCG
ATGATGTTTG CGATTGCCTT TATCGTGCTT TTCACCATAG GCGGGTTATC GGGACTTATG
CTTGCGATAA CGCCAGTTGA CTTCCAATAC CACGATACCT ACTTCGTAGT GGCTCACTTT
CACTATGTAC TTGTGACAGG GGCCGTCTTT TCCATCATGG CAGCCGTTTA CTATTGGCTA
CCTAAATGGA CCGGCAAAAT GTACGACACT ACATTGGCAA AATGGCATTT CTGGTGTTCC
CTCGTGTCGG TGAATGTTTT GTTTTTCCCT ATGCACTTTG TAGGTTTAGC GGGTATGCCA
CGTCGTATTC CAGATTATGC TTTACAGTTC GCCGATTTTA ACAAGTGGAT AAGCTTGGGC
GGCTTCGCAT TTGGTTTATC TCAACTTATC TTCCTCGCAT TGCTTATTAA GGCTTGCAAA
AAGCAGGGAG AAGGCGTGTC AGCGCAGGTA TGGGACGGCG CTGAAGGTCT TGAGTGGGAA
ATTCCATCAC CTGCTCCTTA CCACACGTTC GAAACCCCAC CTGTTGTTAA ATAA
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| Protein sequence | MSKATEVISP DTSAQHDDHE HHDHIPKGVT RWLFTTNHKD IGTLYLWFAF IMFLVGGAMA
MVIRAELFQP GLQIVEPNFF NQMTTVHGLI MVFGAVMPAF TGLANWLIPM MIGAPDMALP
RMNNWSFWIL PGAFLILLSS LFMEGGGPAF GWTFYAPLST TYSGDSTALF VFSVHIMGIS
SIMGAINVIV TIFNMRAPGM TWMKMPLFVW TWLITAFLLI AVMPVLAGAV TMVLTDKFFG
TSFFDAAGGG DPVMFQHIFW FFGHPEVYIM ILPAFGIISQ IVPTFSRKKL FGYASMVYAT
ASIALLSFVV WAHHMFTTGM PVYMEMFFMF ATMLISVPTG VKVFNWVATM WRGSLSFEMP
MMFAIAFIVL FTIGGLSGLM LAITPVDFQY HDTYFVVAHF HYVLVTGAVF SIMAAVYYWL
PKWTGKMYDT TLAKWHFWCS LVSVNVLFFP MHFVGLAGMP RRIPDYALQF ADFNKWISLG
GFAFGLSQLI FLALLIKACK KQGEGVSAQV WDGAEGLEWE IPSPAPYHTF ETPPVVK
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