Gene MADE_03993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03993 
Symbol 
ID6777498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4301497 
End bp4302306 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content50% 
IMG OID642757444 
Productputative bioH protein 
Protein accessionYP_002128277 
Protein GI196158788 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR01738] putative pimeloyl-BioC--CoA transferase BioH 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.39714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGTT TGCATACAAA CGGCGAGCTT GTCACCCGTA CAAAGGGTAC AGGCGTAGAT 
CTTGTATTTC TTCATGGATG GGGGATGAAT AGCGGTGCGT TCACATCCTT CCTTCCCTAC
TTAAGCGATA ACTTTCGCGT GACTACTATT GATCTTCCCG GGTTCGGAGA GAATGCGGGT
ATCGTTCCTT CCCCGTATAA CGCAGATTCG CTGGCGCAGG CTGTAGTGAA TAAACTACCA
GAGCGATGCG TCGTGGTTGG CTGGTCTTTA GGCGGGTTGG TTGCGCAGAA GCTTGCCCTA
TTAGCGCCTG AAAAACTTAC CGGTCTCGTC ACCATCGCCT CAACGCCGCG TTTTATTGCA
GGGCCTTGTT GGCCTGGTAT TGCAGCCGAT TTACTCTCTA TGTTTGAAGC GCAGCTTGAG
AAAAACTATC AAAAAACCCT AGAACGCTTC TTGGCTATCC AAGCGATGGG AAGTGAAACC
GCTAAGCAGG ATATTAAAGC CATTAGGGAA CAGGTAACCC AATTCCCTGC TCCTGCGGAA
GAAGCGCTTA AAAAAGGGCT TCGCATGTTG TCCACCGAAG ACATGCGACA AGATGTGGGG
CGCATAATTG TGCCAACACT GCGCCTCTAC GGAAGATTAG ACAGCTTGGT GCCGACTAGC
GGAATTGACA GAATATGTGA GCTGCATCCG CAGGCTGATA CGGTGGTGTT GCCTCATGCT
TCTCATGCAC CATTTATTTC CCATCCTCAG CAAACCGCTG ACATCCTGTT TCGTTTCATG
GCAGGTATTT ACCAGCAAAA GGCATCCTAA
 
Protein sequence
MESLHTNGEL VTRTKGTGVD LVFLHGWGMN SGAFTSFLPY LSDNFRVTTI DLPGFGENAG 
IVPSPYNADS LAQAVVNKLP ERCVVVGWSL GGLVAQKLAL LAPEKLTGLV TIASTPRFIA
GPCWPGIAAD LLSMFEAQLE KNYQKTLERF LAIQAMGSET AKQDIKAIRE QVTQFPAPAE
EALKKGLRML STEDMRQDVG RIIVPTLRLY GRLDSLVPTS GIDRICELHP QADTVVLPHA
SHAPFISHPQ QTADILFRFM AGIYQQKAS