Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03993 |
Symbol | |
ID | 6777498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 4301497 |
End bp | 4302306 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642757444 |
Product | putative bioH protein |
Protein accession | YP_002128277 |
Protein GI | 196158788 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01738] putative pimeloyl-BioC--CoA transferase BioH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.39714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAGTT TGCATACAAA CGGCGAGCTT GTCACCCGTA CAAAGGGTAC AGGCGTAGAT CTTGTATTTC TTCATGGATG GGGGATGAAT AGCGGTGCGT TCACATCCTT CCTTCCCTAC TTAAGCGATA ACTTTCGCGT GACTACTATT GATCTTCCCG GGTTCGGAGA GAATGCGGGT ATCGTTCCTT CCCCGTATAA CGCAGATTCG CTGGCGCAGG CTGTAGTGAA TAAACTACCA GAGCGATGCG TCGTGGTTGG CTGGTCTTTA GGCGGGTTGG TTGCGCAGAA GCTTGCCCTA TTAGCGCCTG AAAAACTTAC CGGTCTCGTC ACCATCGCCT CAACGCCGCG TTTTATTGCA GGGCCTTGTT GGCCTGGTAT TGCAGCCGAT TTACTCTCTA TGTTTGAAGC GCAGCTTGAG AAAAACTATC AAAAAACCCT AGAACGCTTC TTGGCTATCC AAGCGATGGG AAGTGAAACC GCTAAGCAGG ATATTAAAGC CATTAGGGAA CAGGTAACCC AATTCCCTGC TCCTGCGGAA GAAGCGCTTA AAAAAGGGCT TCGCATGTTG TCCACCGAAG ACATGCGACA AGATGTGGGG CGCATAATTG TGCCAACACT GCGCCTCTAC GGAAGATTAG ACAGCTTGGT GCCGACTAGC GGAATTGACA GAATATGTGA GCTGCATCCG CAGGCTGATA CGGTGGTGTT GCCTCATGCT TCTCATGCAC CATTTATTTC CCATCCTCAG CAAACCGCTG ACATCCTGTT TCGTTTCATG GCAGGTATTT ACCAGCAAAA GGCATCCTAA
|
Protein sequence | MESLHTNGEL VTRTKGTGVD LVFLHGWGMN SGAFTSFLPY LSDNFRVTTI DLPGFGENAG IVPSPYNADS LAQAVVNKLP ERCVVVGWSL GGLVAQKLAL LAPEKLTGLV TIASTPRFIA GPCWPGIAAD LLSMFEAQLE KNYQKTLERF LAIQAMGSET AKQDIKAIRE QVTQFPAPAE EALKKGLRML STEDMRQDVG RIIVPTLRLY GRLDSLVPTS GIDRICELHP QADTVVLPHA SHAPFISHPQ QTADILFRFM AGIYQQKAS
|
| |