Gene MADE_03988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03988 
Symbol 
ID6777547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp4294835 
End bp4295320 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content46% 
IMG OID642757439 
Producttranscription elongation factor GreB 
Protein accessionYP_002128272 
Protein GI196158783 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.22969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACAC CGCTTATCAC TCGAAAAGGC TACCTTAAGC TGAAACAAGA GCTGGACTTC 
TTGTGGCGTG AAGAACGACC AGAGATTACT CGCAAAGTAA CCTGGGCTGC CAGCCTAGGC 
GATAGAAGTG AGAATGCCGA CTACCAATAC AACAAAAAGA AGCTGCGTGA AATTGACCGC 
CGCGTTCGCT ACCTACGCAA GTGCTTAGAA AACCTTAAAG TTGTGGATTA CGACCCACAG 
CAAGAAGGAA AAGTTTTTTT TGGCGCCTGG GTTGAAATTG AGAACGAGGC AGGAAAAGTA 
ATGGAGCTGC GCTTGGTAGG CTATGATGAA ATTTTTGGCC GCAGGGACTA CATTTCTATC 
GACTCTCCTA TGGCGAGAGC ATTGATTGGC AAAGAAGAAG ACGATGAGTT TGTTGTGAAG 
ACCGAAACGG GCACCAAAGA ATGGTGGATA AACCGAATTT GGTACGATGC CACAGACAAA 
CTATAA
 
Protein sequence
MKTPLITRKG YLKLKQELDF LWREERPEIT RKVTWAASLG DRSENADYQY NKKKLREIDR 
RVRYLRKCLE NLKVVDYDPQ QEGKVFFGAW VEIENEAGKV MELRLVGYDE IFGRRDYISI 
DSPMARALIG KEEDDEFVVK TETGTKEWWI NRIWYDATDK L