| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03986 |
|---|
| Symbol | |
|---|
| ID | 6777586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 4293341 |
|---|
| End bp | 4294126 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642757437 |
|---|
| Product | putative periplasmic peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_002128270 |
|---|
| Protein GI | 196158781 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000158927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGT CGCTCGTTGC CTTATCTACT ATCGCTGCGC TAGGCCTTTT CGCTTGCCAG
CCAAATACAT CTGATGAGGC CGCTTCTACA AGCGCTGATA GTGCAAAAAC AACTGCTGTT
GCAGCAGAAG AAATGACAGA TACGCAAAAA CAAGCTTACG CCATGGGCGC AAGCATGGGT
CTGTTCGTAA GCAACCGTGC CGAACAACAA GAACAACTTG GCCTAACGCT AGACCAAGAC
GCGCTACAAC AAGGTTTTAA AGACGGCCTA AACGACACGC TAAAATTTAC ACCTGAGCAA
ATTCAACAAA TTGCTCAACA GGGTGAAGAA GTATTGCGTG CTAAACAGCA AGAAATGGCT
GAACAAGCTG CTGAGAAAAA CATTGAAGCA GGCATTGCTT ACCTAGAAGA AAACGGTAAG
AAAGAAGGTG TTGTTACTAC TGAATCAGGC CTTCAATATG AAGTGCTCGA AGAAGGCGAA
GGCGCAAGCC CGGTAGCAAC CGACATGGTA AAAGTTCACT ATCGTGGCAC TTTGCTAGAC
GGCACCGAGT TCGACTCTTC ATACAAGCGT GGCGAGCCTG CTGAATTCCC GCTTAACCGC
GTTATCGCAG GCTGGACCGA AGGTGTTCAA TTGATGAAAG AAGGCGCGAA ATATCGCTTC
CACATTCCAT CTGAACTAGC CTATGGACAG CGCTCTACTG GCGCTATCAC ACCTAATTCA
ACGCTAATCT TTGACGTTGA GCTTTTAGAG GTGGTTAAGC CTGAAGCCGA AGCACCAGCT
GAGTAA
|
|---|
| Protein sequence | MQKSLVALST IAALGLFACQ PNTSDEAAST SADSAKTTAV AAEEMTDTQK QAYAMGASMG
LFVSNRAEQQ EQLGLTLDQD ALQQGFKDGL NDTLKFTPEQ IQQIAQQGEE VLRAKQQEMA
EQAAEKNIEA GIAYLEENGK KEGVVTTESG LQYEVLEEGE GASPVATDMV KVHYRGTLLD
GTEFDSSYKR GEPAEFPLNR VIAGWTEGVQ LMKEGAKYRF HIPSELAYGQ RSTGAITPNS
TLIFDVELLE VVKPEAEAPA E
|
|---|
| |