Gene MADE_03979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03979 
Symbol 
ID6777653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp4287658 
End bp4288161 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content47% 
IMG OID642757430 
Producthypothetical protein 
Protein accessionYP_002128263 
Protein GI196158774 
COG category[S] Function unknown 
COG ID[COG5589] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02444] conserved hypothetical protein TIGR02444 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCGC TTAATCTTGA GACCAGTGCT TTCTGGGCGT ACAGCGTTTC TCGCTATACC 
AAAGGGGACA TGGCGCCGCT TGCTATTTTG CTGCAAGACA ATCACAAGGT GAATGTTAAC 
GTTCTCTTGC TGATATGTTG GTGCTTAGAG AACAATACCA TTATAAACTT GCCTCAGCTT 
AAGGCGGTTA TCGAGGCCGC GGCCCCGACA GATTCAACAT TGCAAGCCCA TAGAGCCAAA 
CGAAAAGCCG CACACCCTGA TAACGGGGGG GATAGAACCG TTTATGATGC GCTAAAAGAA 
GAAGAGCTTG AACTTGAACG AGCGCAGCAG CGCGACATCG TTACATCGTT TAACGGGCAA 
TCGGTAACAT ATTTAGGGCA GGCGCAGCTA TCTTCTTCAA ATATATTTAA CGCATCTATC 
GCAGCGTTAA TTAATGCCTA CTCGCTTCGC GACAATAGCG AGGCTCGACG TTTGGTGAGC 
CTTGTGATCA AACAACTATC GTAA
 
Protein sequence
MQPLNLETSA FWAYSVSRYT KGDMAPLAIL LQDNHKVNVN VLLLICWCLE NNTIINLPQL 
KAVIEAAAPT DSTLQAHRAK RKAAHPDNGG DRTVYDALKE EELELERAQQ RDIVTSFNGQ 
SVTYLGQAQL SSSNIFNASI AALINAYSLR DNSEARRLVS LVIKQLS