Gene MADE_03966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03966 
Symbol 
ID6777785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4273588 
End bp4274352 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content47% 
IMG OID642757417 
Productputative general secretion pathway protein N 
Protein accessionYP_002128250 
Protein GI196158761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCGA AAGTTAGTTG GATAATAGGC GGCATTCTCG CCTTTTTATT GTTTGCCATC 
GCATACATCC CTGCAGTACA AGTGATTGGC CGACTGTCGC TGCCAAATAA TGTTTCTATC
AGCGGGGTCA GCGGCAGCTT ATTTTCGGGT AAAGCGCAGA CGGTGGTAGT GAATAGCCTT
CCAATTAATA ACGTAAAATG GGAGCTTAAT CCGCTACACC TGTTACTGGG TAAAGCTAAG
CTTGACCTCA AAGCAGGTAA CATTCGCGAT AAAAACGACA TTGCCTTTGA AGGGCCTGTT
ACCACCGGGC TTTTTAGCCA AAATACGGTT AATACTGAAA ACTTTACCCT TTACCTTCCT
GTAGACAGAG TGCTTGCGCA GGTTCGCTTA CCTCTGCCCG TTAACGCAGG CGGGCGCTTT
AAGGTCTCGC TTAATGACCT AACCTTTGGT CCAGCGTGTG AGTCGCTTGA TGGTACGGGA
GATTGGCTTA ATGCAACGGT AGCAGGTACC CAAGGGCCCA TTGATTTCGG CACCTACTCT
GCGACACTTC GTTGTGAAGG TGAAGATATT GGCATAATGG TGAACGAGCC TAATTTGCTA
AGCTTATCTA TGGATGCGGT TATACCGACA AACATGAAAA ACATTCGAGT GAGCGGTCAA
TTTAAGCCTG ATGCGAGCTT GCCCAATGAA GTTCATCAAG CGGCACGCTT ATTTGGTACG
CCTAATAACA GTGGCTTTAT TGCGTTTCAG ATTCCTCGAA CGTAA
 
Protein sequence
MKSKVSWIIG GILAFLLFAI AYIPAVQVIG RLSLPNNVSI SGVSGSLFSG KAQTVVVNSL 
PINNVKWELN PLHLLLGKAK LDLKAGNIRD KNDIAFEGPV TTGLFSQNTV NTENFTLYLP
VDRVLAQVRL PLPVNAGGRF KVSLNDLTFG PACESLDGTG DWLNATVAGT QGPIDFGTYS
ATLRCEGEDI GIMVNEPNLL SLSMDAVIPT NMKNIRVSGQ FKPDASLPNE VHQAARLFGT
PNNSGFIAFQ IPRT