Gene MADE_03961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03961 
Symbol 
ID6777840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp4269736 
End bp4270215 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content51% 
IMG OID642757412 
Productgeneral secretion pathway protein I 
Protein accessionYP_002128245 
Protein GI196158756 
COG category 
COG ID 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCAT CCATCTTTAA GCGCAAAGCA GATGCAAAGA CACCGTTGAC AAGGTCGTTT 
TTCAAACCTG CACTGGATAA AAGCAGCAAC TTACCCTATG CCCCGCGCTA CCAAACTGGA 
TTAACCCTGC TTGAAGTGAT GGTGGCGCTA CTTATTTTTG CGCTTACCGG CACCGCCGTA 
CTCAAAGCGG CAGGCGAGCA TTTATCCAGT GTTGGGCAGA TAGAGTCGGT GACCTTCGCC 
AACTGGGTGG CAAGCAACCG CTTAAACCAA CTTCAGCTAG ATACTACGTG GCCGCCTAAG 
AACAATTTGA AAGGTACCAT GGAGATGGCC GATCGCACCT GGTACTGGCA ACAAACCGTC 
ACTAAAACCA ATGACAATGA TTTACGGTCT GTCACCGTTT CTGTCGGCGA AGACGAAAGC 
TACGACAGCT CCGTAACGTC TGTGACGACC TTTGTCGCAA AGCCGACGGC GGGAAATTAG
 
Protein sequence
MKASIFKRKA DAKTPLTRSF FKPALDKSSN LPYAPRYQTG LTLLEVMVAL LIFALTGTAV 
LKAAGEHLSS VGQIESVTFA NWVASNRLNQ LQLDTTWPPK NNLKGTMEMA DRTWYWQQTV 
TKTNDNDLRS VTVSVGEDES YDSSVTSVTT FVAKPTAGN