| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03958 |
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| Symbol | |
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| ID | 6777865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 4267444 |
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| End bp | 4268670 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642757409 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_002128242 |
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| Protein GI | 196158753 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCTT TCGCTTATAA AGCGGTTAAT GCCCGCGGTA AGAACACAAA TGGCGTGCTT
GAAGGCGATA ATGCCCGTCA GGTGCGCCAA CAGCTGCGCG AAAAGGGCTT AATTCCTTTG
GAAGTAGAGC AAGTTGCAGA GCGCACACAA AACGAAGGCA AAGGGCTTTC ATTTTCACTG
TTTAAACCAC GCATTTCAGC CTCCGATTTA GCGCTACTTA CACGGCAAAT GGCTACCCTT
GTAGAGTCGG CCCTTCCGGT TGAAGAAGCC TTGCTTGCCG TTGCGGAACA ATGCGAAAAG
CCCCGCCAGA AAAACATGAT GATGGCAGTA CGCAGTAAAG TCGTGGAAGG TCACGGGCTT
GCCGATGCAT TAGGACAGTT TCCCAGTGTG TTTGACGAGT TATACCGCGC CATGGTGGCG
GCAGGTGAAA AGTCAGGCCA CCTTGATACC GTGCTTAACC GCTTAGCCGA CTATACCGAG
CGCAGGCAGC AAACCCGCAG CCAAATTACT CAGGCGATGA TTTATCCATC GTTAATGCTG
TTTTTTGCAA TGGGTATCGT ACTGCTGCTT TTAACCGTGG TAGTACCAAA AATTGTGGGG
CAATTCGACC ACATGGGGCA AGACCTTCCG GGTATTACCC AATTCCTTAT TTCAGTGAGC
ACTTGGCTTC AAAACTACGG GTTGTTCATG CTAATCGGCA TAGGCGTGCT TATAGTTATT
ATACAGCGCG TATTGCAGCA AAAGCATATG AAGCTGCGCT ATCACAAAGC GCTTTTAACC
TTACCTTTGA TAGGCCGCGT GTCGCGCGGT CTAAACACGG CCCGCTTTGC ACGTACGTTA
AGTATATTAA GTGCCAGCGC AGTGCCGCTA CTTGAAGCTA TGCGTATTTC AGGCGATGTC
CTTGAAAATC AGCATATTAA AAATCAAGTA GCCGACGCCG CTATTAACGT TAAAGAAGGT
AGCAGTTTGA GGGCTGCGCT GGATAACACG AAAATGTTTC CACCTATGAT GATGCATATG
ATTGCGTCAG GTGAAAAGTC GGGCGAATTA CAGCAAATGC TAGCTCGCGC CGCAGATAAT
CAAGATAGGG AATTTGAAGC GCTTATTGGT GTCTCACTTA AGGTATTTGA ACCCTTACTT
ATTGTATCGA TGGCGGGCAT TGTTCTGTTT ATCGTTATGG CAATATTGCA ACCAATTTTA
GCATTGAACA ACATGGTGAA TATTTAA
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| Protein sequence | MAAFAYKAVN ARGKNTNGVL EGDNARQVRQ QLREKGLIPL EVEQVAERTQ NEGKGLSFSL
FKPRISASDL ALLTRQMATL VESALPVEEA LLAVAEQCEK PRQKNMMMAV RSKVVEGHGL
ADALGQFPSV FDELYRAMVA AGEKSGHLDT VLNRLADYTE RRQQTRSQIT QAMIYPSLML
FFAMGIVLLL LTVVVPKIVG QFDHMGQDLP GITQFLISVS TWLQNYGLFM LIGIGVLIVI
IQRVLQQKHM KLRYHKALLT LPLIGRVSRG LNTARFARTL SILSASAVPL LEAMRISGDV
LENQHIKNQV ADAAINVKEG SSLRAALDNT KMFPPMMMHM IASGEKSGEL QQMLARAADN
QDREFEALIG VSLKVFEPLL IVSMAGIVLF IVMAILQPIL ALNNMVNI
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