| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03955 |
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| Symbol | |
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| ID | 6777832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 4262814 |
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| End bp | 4263737 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642757406 |
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| Product | general secretion pathway protein C |
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| Protein accession | YP_002128239 |
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| Protein GI | 196158750 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3031] Type II secretory pathway, component PulC |
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| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACATTTA ATAGACCCAA CCCACAACCT CTGGTTGTTT ATCTAAGCCA GCATCAAAAA
CAGCTACATA CCATCGTAGT GGTTCTGCTT AGCCTGTATT TAATTGCATT CGCTGCCAAA
TTTGTGTGGC GAATTATACC CGAACCTCAG CTATCTGCGA CACCCACAAT AAGCCGTGCT
CCAGTTATTT CTTCGTCATC AGGCAAAAGT GGGGTCAACA TTGCCAAAAT ACAACAGCTG
AATTTATTTG GTAATGCGGC AGCAAAGCCA GCCGAGCCCG TAGCGGAGGT GACTGACGCA
CCAGAAACAC GCTTAAACTT AACGCTAACA GGGGTGGTGG CAAGTTCAGA CCAAGAAGCA
GGCACCGCTA TTATAGAAAA CCGCGGCAGC CAAGCGGTAT ACGGTTTAGG CGAAAAAATT
GAGGGCACCA ACGCCACGTT GCAAAAGGTG TATAACGACC GTGTAATCAT TAAAAATGGG
GTGAGAAACG AAACCCTAAT GTTAGACGGC ATTGATTATG ACGAAGCCAA CAGGCGCCGT
GAAATGCAGG CAAGACAGCG CCCTGCACCT CAAGAAGATG AATATGAAGA CGATACCGTT
GAACTAAGCG AAGAAGCGAT AGAGGCCACT GCGGCACTAA GAGAACGCCC AGCAAGCTTT
ACTGACTTTA TTTCAATATC GCCAAAAACA GAAGAAGGCC AACTTATTGG TTACCAGGTG
AGCCCAGGAA AAGAGCCTGA ACTATTTAAA TCGGCAGGTC TTGAAGCTGG CGATGTCATT
ACACAAATTA ACGGGCTAGA CCTTACCGAC TTGCAGCAAT CGCAAGAGGC ACTGTCTGAG
CTACGCAATG CACAAAATAT AGAATTAACG ATTATTCGAG ATGGCAGTTT AACCACGCTA
TACCTAGATT TACCCGAGGC GTAA
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| Protein sequence | MTFNRPNPQP LVVYLSQHQK QLHTIVVVLL SLYLIAFAAK FVWRIIPEPQ LSATPTISRA
PVISSSSGKS GVNIAKIQQL NLFGNAAAKP AEPVAEVTDA PETRLNLTLT GVVASSDQEA
GTAIIENRGS QAVYGLGEKI EGTNATLQKV YNDRVIIKNG VRNETLMLDG IDYDEANRRR
EMQARQRPAP QEDEYEDDTV ELSEEAIEAT AALRERPASF TDFISISPKT EEGQLIGYQV
SPGKEPELFK SAGLEAGDVI TQINGLDLTD LQQSQEALSE LRNAQNIELT IIRDGSLTTL
YLDLPEA
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