Gene MADE_03954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03954 
Symbol 
ID6777924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4262280 
End bp4262684 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content46% 
IMG OID642757405 
Productheat shock protein 15 
Protein accessionYP_002128238 
Protein GI196158749 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAT CGGAAAGCAA CAATACAACA CAAAACGTCA GGCTGGACAA GTGGCTATGG 
GCTGCAAGGT TTTTTAAAAC CCGAGCCATT GCTAGAGACA TGGTGCAGTC GGGAAAGGTC
CAGTACAACG GGCAGCGAAC CAAGCCTGGT AAACATGTAG AGCTTGGTGC CATGATTAAA
GTTCCCGCAG GGTGGGATAA TCGTGAAATA AAGGTGCTAG GCTTAAGTGA CAAGCGCTTG
AGTGCGCCTT TGGCACAAGC ACTTTTCGAA GAAACGGCTG AAAGTGTAAC AAAACGTGAA
GAAAACCAAG CTGCCCGTAA ATTGAGCGCA TTTCACAGCC CTAAACCAGA TCATAGACCT
GATAAAAAGC AGCGACGACA GATTATTAAA TTTAAGCAGC AATAG
 
Protein sequence
MSQSESNNTT QNVRLDKWLW AARFFKTRAI ARDMVQSGKV QYNGQRTKPG KHVELGAMIK 
VPAGWDNREI KVLGLSDKRL SAPLAQALFE ETAESVTKRE ENQAARKLSA FHSPKPDHRP
DKKQRRQIIK FKQQ