Gene MADE_03948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03948 
SymbolenvZ 
ID6777939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4253950 
End bp4255284 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content45% 
IMG OID642757399 
Productosmolarity sensor protein 
Protein accessionYP_002128232 
Protein GI196158743 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTAA TTCCCAAAAG TGCATTTGGC CAGACCGTTA TGCTGATTGG TGTGCTTCTG 
CTCATTAATC AGATAGTGTC CTACATCTCT GTCACCTATT ACTTTATTCA ACCTAGTTAC
CAACAGATCA ATAGCCTATT AGCGACGCAA GTTAAGTCAG TATTGGCCAA CGACTTACTC
GTCACTAACC AAGAAACCCG TGACCGGTAT TTTCAAAAAA CCCAGGTGCA CGTCTTCGAT
GAAAGTGTTG CTAAACAAAA CGGGTTAGAA AGTGCCGTTT ACTATGGCTA TATATCATCT
CAGGTTAGTG AACAACTTAG TCAGTTAGCT GACGTACGCA TTAGCACTAC CACACAGGCC
AGCGACGAAA ACGCCCCTTA CATTGTGTGG ATATCTTTAA ACCGATATCC AGATACATGG
ATTTCAATAC CGATTTCAGG GTTAAACGAA GCCAATATTT CACCGCTTAC CATGTATTTA
ATGGTAATTG GTATATTAAG CGTAGCCGGC GGCTGGCTGT TTGTACGACG TATGACCCGC
CCCTTATCTG CCCTTCAAAA GGCAGCTATT TCCGTGGGTA AAGGTGAACA CCCGGCGCCG
CTTCGCGAGC AAGGCAGCAC CGAAATGATT CAGGTTACCC GCGCGTTCAA CCGCATGAAT
CAGGGTATTA AGCAGCTAGA GAACGACAGA AACATTATGA CGGCGGGTAT TTCACACGAT
TTGCGCACCC CACTTACCCG AATTCGCCTT GCCTCTGAAA TGCTGCCTGA AGACCAGGAC
TGGATAAAAG ATGGCATTGT AAACGACATT GAAGACATGA ACGCTATCAT CGATCAGTTC
ATTGATTATG CCCGCTATGA CACCGAAGAA GTAACCCAAG AAACCGATTT AAACACCATT
ATTGCTGAGC TTGTTCAAGC AAGGCACCTT GACGACAAGC ACCATATTGA GCTGAAACTC
AATACTATTC CCCCGTTGCC CTTAAGACGC ATTGCAATGA AGCGGGTAAT AGATAATCTA
ATTGAGAATG CATTTAAATA TGGGTCTGAT GAAATTGCGA TTAGCAGCTT TTATAACCGC
CATGAGAAAC GGGTTTATTG CAAAGTACGT GACTTCGGGC CGGGCATTCC ACATGAAGAA
TTAGCAGGTG TATTCATGCC GTTTGCCCAA GGCGATAAGG CGCGTAATTC GTCCGGGTCT
GGGTTAGGGC TTGCCATTAT AAGACGTATT ATTGAAGCCC ACGACGGGGA AGTCACCTTA
CGCAACCATC CTCAACAAGG CCTTGTCGCT GAGTTTTACC TGCCCTATTT GGCGGAACTA
CCCGATAAAA AATAA
 
Protein sequence
MRLIPKSAFG QTVMLIGVLL LINQIVSYIS VTYYFIQPSY QQINSLLATQ VKSVLANDLL 
VTNQETRDRY FQKTQVHVFD ESVAKQNGLE SAVYYGYISS QVSEQLSQLA DVRISTTTQA
SDENAPYIVW ISLNRYPDTW ISIPISGLNE ANISPLTMYL MVIGILSVAG GWLFVRRMTR
PLSALQKAAI SVGKGEHPAP LREQGSTEMI QVTRAFNRMN QGIKQLENDR NIMTAGISHD
LRTPLTRIRL ASEMLPEDQD WIKDGIVNDI EDMNAIIDQF IDYARYDTEE VTQETDLNTI
IAELVQARHL DDKHHIELKL NTIPPLPLRR IAMKRVIDNL IENAFKYGSD EIAISSFYNR
HEKRVYCKVR DFGPGIPHEE LAGVFMPFAQ GDKARNSSGS GLGLAIIRRI IEAHDGEVTL
RNHPQQGLVA EFYLPYLAEL PDKK