| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03937 |
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| Symbol | |
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| ID | 6777935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 4241983 |
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| End bp | 4242981 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642757388 |
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| Product | tRNA-dihydrouridine synthase B |
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| Protein accession | YP_002128221 |
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| Protein GI | 196158732 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.259416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATTG GACCTTACGA GTTAGAAAAC AATTTGATGT TGGCCCCCAT GGCTGGCGTG
ACTGATAGAC CGTTTCGTCA ACTATGCAAA CGCTTGGGTG CAGGGCTTGT TGTTTCCGAA
ATGCTTTCGA GTAATCCGAA GGTTTGGAAC ACTGCCAAGT CACAAGCGCG CATGAACCAT
GAGGGCGAAG AAGGCATTCG CTCTGTACAG ATAGCTGGGG CAGACCCTGA GCTTATGGCT
CAAGCAGCAC AATTTAATGT AGATAACGGT GCGCAAATCA TCGATATCAA CATGGGTTGT
CCTGCGAAAA AGGTCAACAA GAAGCTGGCA GGCTCTGCTT TGCTTCAGTA CCCAGATACG
GTGGAGGCAA TCGTCAAAGC AGTCGTTAAT GCTGTTGATG TACCCGTAAC ACTGAAAATT
CGTACCGGCT GGAATCCAGA AAATCGCAAT GGGGTAGAAA TTGCCCGCAT TGCAGAGCAA
AACGGCATAC AGTCGCTTGC TGTTCACGGC AGAACGCGAG CTTGTATGTA TAAAGGAGAG
GCTGAATACA GCACCATACG TCGAATAAAG GCGGCAATTT CAATTCCTGT TATTGCAAAT
GGTGATATTA CCTCTCCACA GAAAGCACAA GAGGTGCTGA ATTACACTGG TGCAGATGGC
GTAATGATAG GTCGCGGCGC GCAAGGTAAG CCTTGGATAT TCAACCAAAT CCAACATTAT
CTTGAAACGG GCGAGAACCT AGCACCACCG CCGCTGTCAG AGCAATATGA GATTTTGCAC
GAGCACGTAG CCAATGTGCA GGATTTTTAT GGCGACATAG CCGGTGTAAG AATTGCCCGT
AAGCACGTGG GCTGGTATCT CTCGGAGCAC GATACGGATC GTCAGTTTCG TAAAACGTTT
AACGCTATCG ATGATGCAAA TGAGCAACTC GATGCACTAA ATGCATATTT TCAAGCGCTG
CAGACTCGAG AAACCCGACA GATTTCTCCC GCAGCATAG
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| Protein sequence | MRIGPYELEN NLMLAPMAGV TDRPFRQLCK RLGAGLVVSE MLSSNPKVWN TAKSQARMNH
EGEEGIRSVQ IAGADPELMA QAAQFNVDNG AQIIDINMGC PAKKVNKKLA GSALLQYPDT
VEAIVKAVVN AVDVPVTLKI RTGWNPENRN GVEIARIAEQ NGIQSLAVHG RTRACMYKGE
AEYSTIRRIK AAISIPVIAN GDITSPQKAQ EVLNYTGADG VMIGRGAQGK PWIFNQIQHY
LETGENLAPP PLSEQYEILH EHVANVQDFY GDIAGVRIAR KHVGWYLSEH DTDRQFRKTF
NAIDDANEQL DALNAYFQAL QTRETRQISP AA
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