| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03930 |
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| Symbol | |
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| ID | 6778423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4233871 |
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| End bp | 4236018 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642757381 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_002128214 |
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| Protein GI | 196158725 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAAAG ATTTACCGCC CCGTTATTAC CTGACACATT TTCATGAATT TCTCGCGTTC
TTTGAAGGGG CGAGCCAGTC GTTATTAAGC AGTGAAGCTG TGCGCTTTAT CCAGCGTTTC
AAAGCCCTTG ATGAGGACAA GCAGTGTATT GTGGTTCGCG CGGCTAATCG CAAATATGCA
GTGATAGATA GAATGCAGTT CAATTATGGT GAAATTGTTG CCCCTCAACA TCAAATTGAC
TGTTTAATTA AGGACGGCTG GTTTGGCGAT TTAACTCACG CTACGCTTAA TGACATTGCT
GGGGTTTTGA CAAAAGATGC CCTGCTCGCG CTTTTGTCAG AATACGGCAG CATTCAAGGT
CTTGCTTCTC AGAGAAAACC TAAACTCGTC AACTTACTGA GTGAGCAAAT TACTGCCCGA
GGATGGCCAG AAAGTTTTTC ACTTGAAAGC TACTTAGTGT GTTTATTCGA TAGTGCCCTG
CGCTTCTTAT TGTTTATTTA TTTTGGTAAC ACAAAAAGCC GTTTAAATCA GTTTTCTATG
CGCGACCTTG GGGTAATGAG AACACGCTCT GATTCTGTTA CCGACACCGC GCGCTTTGAA
AGTAAAGACG ATGCACTGGC CGCGTGGTTT TATGCCAATC ATTCAAGCCA GCTTGCCTTC
TATAACCATG AGACATTGTT ATCGCTTGCA GATAGCGAAT TCCCAGAAAC AGAAGGGGTG
TCAGCCAGTT TTTATCGCGA CCAGCTACTT TACGCACTAG GGCTTAAAGT ACTTGAGGTT
AACCGCGATA AGGGGCTTAA CATACTGGCA TTAGCGCAAA GCGATAAAGC AAAAGAAAAG
TGGCTAAGAG AAAGCTATAA AGACGGTAAC GACGGTGAAG TTCGACGCGC TTTAGAGCAC
ATCATAGATA ATCCCCAGTC AGATACCTTG CTGGCTTTTG CGGAAGACTT TTATGCCCGC
AAATATCATA AAAAGCGCAC CAGCACCGTT ACCGACATGC TGAGAAACGC AAGTAGAACC
TTAGCCATAG ATGTTAGTCA AAATCAGCAG GTAGAGCGGG GAGTGCTGGC GCATTATGCC
AGACAGGGAG TTCAAGGGTG GCGAACAGAG AACCGTTTAT GGCGCAGTTT GTTTGGCCTC
ACTTTTTGGA AGCAGCTTTA TGAAGAAGAT ACTCTGGTCA CGGAATTTGA TAGAAGGCCG
CTGTCGCTGA AGCAAAATAA TTTTTATGCA AAGTTTGAAG ATAGCATCGA GACTTTACTC
GATGCGCTTG ATAGCAAAGA AAAGCTGCGC TTTCACATAC ATAAAATGGC GACCCAACAC
TACGGTAAAG TAAACAGCTT ATTTATGTGG TCGAGCCATT TGCTGACTCC TATTGAGGCG
CTTATAGAGC ACGGTTCGCT GAGTGCGATA TACGCATTAC TTCGCATGAT GAGCAAAGAC
TTTGAAAGCC TGCGAGACGG TTTTCCCGAT ATTATGGTAT TGGATGATTC GCTTCGCTTT
GAAGAAATAA AGGCGCCGGG CGATCAACTG CGCCGGAACC AATTGGTTTC TATTCAGCGT
CTACAGCAAG CCGGATTCGA CGTGGCTGTT ACCACGGTAA ATTGGGTTCG CGACCCAGCG
CAGCCCTATG TTGTGGTAGA CATTGAAACT ACGGGCGGGA ATAACAGCTA TAACCGTATT
ACTGAAATAG GCATGGTTAA GCTAGTTGGG GGAAAAGAGG TAGATAGGTT TCAAACCTTA
CTCAACCCAC AGCGACGAAT ACCAAGTAGT ATCACGCGTC TTACGGGTAT CTCTGACGAT
ATGGTTGCCG ATGCACCGCT TTTCGCAGAA GTAGCCGATC ATATCGCCAG CTTTACCGAA
GATGCTGTGT TTGTCGCGCA TAACGTAAAT TTTGACTATG GGTTTATTAA ACAGGAATTT
GCGAGATTAG AGCAGTCGTT CAGGCGGCCT AAAATGTGTA CTGTGCGGGA GATGCGCCGC
ACCCACCCGG GGTTATCTTC TTATTCATTG GCAAACCTGA CTAAGCATTT TCATATCGAC
ATGGAGCAAC ATCACCGCGC GCTAAGCGAC GCTAAAGCGG CTGCAGAGCT TCTTAAGCTA
GCATTTGAGA AAGATGATGA AGGCTTCAGT GTTGGTGATA ATGTTTAG
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| Protein sequence | MRKDLPPRYY LTHFHEFLAF FEGASQSLLS SEAVRFIQRF KALDEDKQCI VVRAANRKYA
VIDRMQFNYG EIVAPQHQID CLIKDGWFGD LTHATLNDIA GVLTKDALLA LLSEYGSIQG
LASQRKPKLV NLLSEQITAR GWPESFSLES YLVCLFDSAL RFLLFIYFGN TKSRLNQFSM
RDLGVMRTRS DSVTDTARFE SKDDALAAWF YANHSSQLAF YNHETLLSLA DSEFPETEGV
SASFYRDQLL YALGLKVLEV NRDKGLNILA LAQSDKAKEK WLRESYKDGN DGEVRRALEH
IIDNPQSDTL LAFAEDFYAR KYHKKRTSTV TDMLRNASRT LAIDVSQNQQ VERGVLAHYA
RQGVQGWRTE NRLWRSLFGL TFWKQLYEED TLVTEFDRRP LSLKQNNFYA KFEDSIETLL
DALDSKEKLR FHIHKMATQH YGKVNSLFMW SSHLLTPIEA LIEHGSLSAI YALLRMMSKD
FESLRDGFPD IMVLDDSLRF EEIKAPGDQL RRNQLVSIQR LQQAGFDVAV TTVNWVRDPA
QPYVVVDIET TGGNNSYNRI TEIGMVKLVG GKEVDRFQTL LNPQRRIPSS ITRLTGISDD
MVADAPLFAE VADHIASFTE DAVFVAHNVN FDYGFIKQEF ARLEQSFRRP KMCTVREMRR
THPGLSSYSL ANLTKHFHID MEQHHRALSD AKAAAELLKL AFEKDDEGFS VGDNV
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