Gene MADE_03920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03920 
Symbol 
ID6777467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4224925 
End bp4225461 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content47% 
IMG OID642757371 
ProductfxsA protein 
Protein accessionYP_002128204 
Protein GI196158715 
COG category[R] General function prediction only 
COG ID[COG3030] Protein affecting phage T7 exclusion by the F plasmid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGGGTTT TATTTTTACT GTTTGCCATA CTGCCTATTT TAGAAATAGC GCTATTGATC 
AATGTAGGTA GCATTATTGG TGGCTGGAAT ACGGTGGGTT TAGTTATTCT ATCGGCGTTT
ATTGGTGCTT ATTTTGTTAA ACGCGAAGGC GTGAGTACGC TGCAAACCGC GCAAGAAAAA
ATGCAGCGAA ATGAAGTGCC AGGAAAAGAG TTAGTAGAAG GTTTAATGTT GGTTGTGGCT
GGGGTTCTTT TGGTTACGCC GGGCTTTATT ACCGACATTT TCGGTTTCTT ATTAGCTATG
CCGGGGTCTC GCCACTTCTT CGCCGCACAA GTGAGTAAGC ATATGAAGAT GCGCGTCGTG
GCTCCGGGCA TGGGGCCGGG TATGGGCCCT AATGGCGCAG GCTTCAATCA GGGGGAATCC
CCTTTTGGAC AGAGTCCATT CGGCAACGGC CCTCAATCGC ACCAACAAGG TGATGATGTC
ATTGAGGGGG AGTACACAGA CAATACCACT AACGACCGAG ATAAGCGTTT AAAATAA
 
Protein sequence
MRVLFLLFAI LPILEIALLI NVGSIIGGWN TVGLVILSAF IGAYFVKREG VSTLQTAQEK 
MQRNEVPGKE LVEGLMLVVA GVLLVTPGFI TDIFGFLLAM PGSRHFFAAQ VSKHMKMRVV
APGMGPGMGP NGAGFNQGES PFGQSPFGNG PQSHQQGDDV IEGEYTDNTT NDRDKRLK