Gene MADE_03909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03909 
Symbol 
ID6777201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4214119 
End bp4214490 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content41% 
IMG OID642757360 
Productcytochrome o ubiquinol oxidase protein (Ubiquinol oxidase chain D) 
Protein accessionYP_002128193 
Protein GI196158704 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTAC ACGATGCAAA ATTAGCTTCA AATACTGACG GTCACGCTTC ATCGACCCAC 
AATAGTGATG ACGCACATGG CGATGTGAAG TCTTATATTA TTGGCTTCAT TCTATCTGTA
GTACTTACCG CTATTCCGTT CACTCTAGTG ATGAATGGCG ACCTATCTAA AGTTACCACG
ATTTGGAGCG TGGTAACTTT GGGCTTGGTT CAAATTTGGG TGCACCTTAA ATACTTTTTG
CACCTTAACT TTGTTACTGA AGAAGGCAGA GCCAATACGT TTTCATTCTT GTTCAGTGCG
CTTATTATTT TCATGGTGGT TGGGTTATCC GTTTGGATCA TCTACGAATC AAACGCCATG
ATGATGTATT AG
 
Protein sequence
MALHDAKLAS NTDGHASSTH NSDDAHGDVK SYIIGFILSV VLTAIPFTLV MNGDLSKVTT 
IWSVVTLGLV QIWVHLKYFL HLNFVTEEGR ANTFSFLFSA LIIFMVVGLS VWIIYESNAM
MMY