| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03908 |
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| Symbol | |
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| ID | 6777149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4213025 |
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| End bp | 4213921 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642757359 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_002128192 |
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| Protein GI | 196158703 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTA CTTATAAACG TTACCTGTCG GTCACCAAAC CCGGCATTAT TATGGGCAAT
GCTATTTCGG TAACGGGCGG TTTCTTATTA GCGTCCCGTG GCGATATAGA TTACTGGCTG
CTGCTCGTAA CGCTCATCGG TTTATCGCTG GTGGTGGCTT CAGGTTGTGT CATTAATAAC
TGCATTGACC GAGATATCGA CGGCAAAATG CAGCGCACGG CCAACCGGGT TACGGTAACA
GGCGAGTTGC CATTGCTTAC TGCGATGTTG CATGGTGCTG TGCTGGGTAT TGCAGGGTTT
GGCTTGTTAG CGCTTTACAC CAACCTTACT GCCGTATTTT TTGCTGTTTT TGGCTACGTT
ATTTATGTGG GTGTTTACAG CCTGTATATG AAGCGAAACT CGGTGTATGG CACCTTCGTT
GGCAGTTTGT CGGGGGCCGT TCCGCCCGTA GTCGGTTATT GCGCCGCGAG CGGTCAGTTT
GATATGGCTG CGGCTATTTT GCTGGGTATG TTCAGCATTT GGCAAATGCC CCATTCTTAT
GCCATCGCTA TCTTTAGATA TAACGACTAT AAGGCGGCTG GAATTCCAGT ATTGCCTGTA
TCGCAAGGTA TTGCGAAAGC AAAACGCCAT ATCGTCCTTC ATATTGCGTT ATTTGCTTTA
GTAGTAATGC TGCTTCCACT TAACGGTTAT ACAGGTATTG GCTTTTTAAC AGTAGCTTTC
GCAACAAGCC TTTGGTGGCT GTTGATGGCG CTGCGCGGAT ACAGACCCGA CATCAACGTA
GAAGGCTGGG CAAAACGTGT TTTTGGTTTC TCCATTGTAA ATATAACGCT GTTATCCATC
GCTATGTCAC TGGACTATCA CACCACAGTT GATAGTTTAT TTGCGGTAGC TTTGTAG
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| Protein sequence | MTFTYKRYLS VTKPGIIMGN AISVTGGFLL ASRGDIDYWL LLVTLIGLSL VVASGCVINN
CIDRDIDGKM QRTANRVTVT GELPLLTAML HGAVLGIAGF GLLALYTNLT AVFFAVFGYV
IYVGVYSLYM KRNSVYGTFV GSLSGAVPPV VGYCAASGQF DMAAAILLGM FSIWQMPHSY
AIAIFRYNDY KAAGIPVLPV SQGIAKAKRH IVLHIALFAL VVMLLPLNGY TGIGFLTVAF
ATSLWWLLMA LRGYRPDINV EGWAKRVFGF SIVNITLLSI AMSLDYHTTV DSLFAVAL
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