Gene MADE_03907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03907 
Symbol 
ID6777206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4212660 
End bp4212959 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content46% 
IMG OID642757358 
Productpeptidyl-prolyl cis-trans isomerase C 
Protein accessionYP_002128191 
Protein GI196158702 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.712439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATAG GCAGCACCAT GGCAACGGCA TCCGCACTTC ACATTTTGGT TAAAACAGAG 
AAAGAAGCGC TTTCTATTTT AGAGCAGCTT AAAAAGGGTA AGGATTTTGC GACGTTAGCA
AAGCGTCATT CTAAATGCCC GTCGGGCAAG CGTGGCGGCG ATCTTGGTGA ATTCCGTAGA
GGCCAAATGG TAAAAGCCTT CGACGATGTG GTGTTCAAAA AAGATGTGCT CAAAGTACAC
GGGCCGGTGA AGACCCGTTT CGGCTACCAC CTTATTAAAA CGCTTTATCG TAGTAATTAA
 
Protein sequence
MQIGSTMATA SALHILVKTE KEALSILEQL KKGKDFATLA KRHSKCPSGK RGGDLGEFRR 
GQMVKAFDDV VFKKDVLKVH GPVKTRFGYH LIKTLYRSN