| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03903 |
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| Symbol | |
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| ID | 6777242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4206562 |
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| End bp | 4209786 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642757354 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002128187 |
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| Protein GI | 196158698 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGG CGCGTCAAAA ACTCCCCCAA AATCATAATA ACAATAGCGT AAGAACAAAT
ATGCCTGTGG CTAATAACCC AAACAACTCA TTAATCATGC TACCTTTTAA GCCCAAGGCT
TTAACGGTTG CGCTGTGTAT GGTGTCGTTC GGCGCAAGTC ACACTGTTAT TGCACAGCCA
GTGCTGCCTC ACCAACAAGC TGAAGTGATT ACACAGAATA CATCGCCGCT CTCCGCAATT
GATTTCTCTA TTCCTGCACA AAGTGCAGAC GAGGCAATCA TCGCGTTTGC CAATCAAGCC
GAGCTGACCG TTGTCTTTCC CTTCAATAAA GTCAGACACG TCTTTGCCAA CGAAGTAAGT
GGTAACTATA CGCCGCAGGA GGCAATTAAA AAGCTTTTAG CTGGTACGGG TCTGAGTGCT
CACATTGTTG ATAACACACG CATAAAAATA GTGCCTGCTA GCGATGGCGA TGAAAACAAT
CACTTGCTAG GTCGCCTGTT TAACGCCATT ACCGCACAAG ACGATAGCTT GGTGACCGTA
CCGGATGAGC AAGGTAGTTA CGACATTGAA TACATTGAAG TAAGGGGCTT GCGAGCGCGT
GTTGCTCAAT CGGTGGGGAT TAAACGCAAC GCGAATGTCA TCATTGATAC TATCCAGTCG
GTGGATATGG GGAAGTTCCC CGATCAGAAC CTCGCAGAAG CGCTGCAGCG TGTGTCTGGC
GTATCTATCG ACCGCGCAGA AGGGGAAGGG CAACTTGTTA CGGTGAGGGG CTTTGGGCCG
GAATTTAATC GGGTTTTATT AAACGGCAGG CCTATGGCAA CCGATAAGCT CGGGCGCGAA
TTCAGTTTTG ATACACTGGC TTCTGAGATT GTCAGCAGTG TAACCGTACA CAAACAAAGT
CAGGCGACCA TGCAGTCGGG TGGCATTGGC GCTACGATCG ATGTTCAAAC TGCTAAACCT
TTATCCTTCA AGGGAATGCG GGCGGCTGGC AGCGTCAAAA TGCAGTACGA TACCAACTCA
CAACAATACG CGCCTTCAAC GTCTGCCATG TTCAGCAACA CCTACTTAAA TAACTCGTTT
GGTATTCTAG CCTCTTTTAC TCAGCACAAG CGCCAAGCGC GGTTAGAAGA AGCGCAAATC
GATGGATGGT TGGTGAATAC TAACGTACCT GAAAGTGAGC TTTCTGAAGA CGTTCCTACG
CTATACGTTC CCAGAAATTA CGATCAAAGA GTGCGTTTTG ACGATAGGAC CCGTACGGGG
TCTGCACTCG TTTTACAGTA TAGACCTAAC AACAAGCTAG AGCTTACTGC CGACTATCTG
GGGTCGACAT TCGATGTGGA GACCTCGGCA ACCTCAATGG GGCATTGGTT TACATCGAGT
AATCTTGAAG ATGTTACGGT TGATAAAAAC GGCACGGCGG TGGCTTTTTC ACAAAACAGT
GGGCACGCCA CCGACTTTCA CGCGCGCACA TTTAACCGTT CATCGACCTT GAAAAGCTTC
GGTTTTGCAG CAAACTATAT CGCGAGCGAT AGCGTAATTG TTGATGCTGA TCTGTCTTAT
TCAATGGCTA ATGTCGATGA CAACAACGGA GAGGGCAATT CACTCTCTCT TATCGGCTAC
TTAAATCGTT CTTCATTCGA CCATACTCAG TCAAATATAT TGCCGGCTAT ATCGGGCTTT
GAACAAGCCA ACCCTCGTCA AGTTAACGCT TTGGGTGAGC CAGTGGGGGT ATCCCATTAC
TTAGACCCAG CTAACGGCCG TTCTCATGTG ATGCTGCGCA GAGGATGGAG TGTTGACGAC
GATATAGGGC AAGCAAAAAT CAATGTAAGC GTGCTTGGCG ACGATAACTG GTTTAGCAAA
ATTGACGTTG GCGGAGCATT AACTCAGCGA GAAAAAGCCA ACGAAAGAAG AGACAACGAA
GCCGACGCAA GACACTGTAG TTTTTGTGGC TATTTTGATG CACCAGATAT TCCCGATAGC
TTTCAAACCA TATTTGACGC AGGCGACGAT TTTCTTGGGT CAATTAGTGG GCATGAGAAC
ATACCTCATC AGTGGCTGCG TCACGACGGC GATACATTAT TTCGTTACTT GGAGAACGCT
GGTGATGTCA GTTTAGCCGC TGAAACCCGG GGGAGTTCTT TCGCGGTTAA GGAAACCGTG
TATGCGGGAT ATGTTCAAGC CGCTATTGAA AAGGATTTTG CGCCTTGGTT TATTGATGTG
CATGCAGGGC TACGGGCTGA GTATACTGAC GTAAAAGTAA GTGGTGTCGA CGAACAGTTG
TCGGCGTTAG TTATTTTAGA CCAAACCGAA CTGGGGCAAG AATTCGGCGC CTCGGTAAGT
ATTGATGAAT CGTCAAACTA CACCAATGTT TTACCTAGCG TAAGTTTTAA AGCCAGCTGG
TTAGATAGCT GGGTATTTCG CGCGGCTTAC AATCACAGTA TTACCCGTCC AACCTTAGAG
CAGATGGCGC CGGGTGTAAC CTATACCACA ACGCGACAAG GTGGCGATTT GCGGGCGCGT
ATCGGAAACG CACAGCTATT GCCATTTGAG GCAAAAAATA TTGATGTGGC TGTGGAGCAT
TACTACCAAG AAAATAGCTA TATATCGGCA GGTTACTTTA GAAAAACGGT AGACAATTTC
ATTGTTAATG AAAGCAGTAC GCAAACCTTT AATAACGTGA CCGACCCTAG TACCGGAACA
AATCCAAACG CGGCTGACGA TGCCGATGCG TTAGCGCAGT TTTCCGTAAT ATCTCCAAGC
AATGGCGAGT CAGCAACGGT CGAAGGGGTC GAGATAGCAG TGCAGCATTT GTTTGGCGAC
TCAGGGTGGG GAATTCAGGC CAATGCGAGC TTTGTAGACA GCAACGCTGA ATTAGACACC
GCCAACATTC GTTCAACCTT TGCGCTTACC GGGCTATCTG GCGCGAAAAA TATGGTGCTG
TTTTACGAGA AGGACGCGCT GCAGTGGCGT GTGGCTTGGA ACCAGCGAGA GGGATTTTTA
CAGTCGCTTA ATCAAACGCA GAGCACCGAG CCCACCTTTG TGAGTCCTTA CGAGCAATGG
GATATGAGCC TTTCATACCA GTTCAGCCCG AAGGTCGCGG TATTTTTTGA AGGCATAAAT
ATTACCAACG AAACCGTGCA TAAACGTGGC AGATTCAGTA ACCACCTTTT ACTAGTGCAA
GATGCTGGAG CCCGCTATGC GTTAGGCGTT AACATTACTT ACTGA
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| Protein sequence | MTQARQKLPQ NHNNNSVRTN MPVANNPNNS LIMLPFKPKA LTVALCMVSF GASHTVIAQP
VLPHQQAEVI TQNTSPLSAI DFSIPAQSAD EAIIAFANQA ELTVVFPFNK VRHVFANEVS
GNYTPQEAIK KLLAGTGLSA HIVDNTRIKI VPASDGDENN HLLGRLFNAI TAQDDSLVTV
PDEQGSYDIE YIEVRGLRAR VAQSVGIKRN ANVIIDTIQS VDMGKFPDQN LAEALQRVSG
VSIDRAEGEG QLVTVRGFGP EFNRVLLNGR PMATDKLGRE FSFDTLASEI VSSVTVHKQS
QATMQSGGIG ATIDVQTAKP LSFKGMRAAG SVKMQYDTNS QQYAPSTSAM FSNTYLNNSF
GILASFTQHK RQARLEEAQI DGWLVNTNVP ESELSEDVPT LYVPRNYDQR VRFDDRTRTG
SALVLQYRPN NKLELTADYL GSTFDVETSA TSMGHWFTSS NLEDVTVDKN GTAVAFSQNS
GHATDFHART FNRSSTLKSF GFAANYIASD SVIVDADLSY SMANVDDNNG EGNSLSLIGY
LNRSSFDHTQ SNILPAISGF EQANPRQVNA LGEPVGVSHY LDPANGRSHV MLRRGWSVDD
DIGQAKINVS VLGDDNWFSK IDVGGALTQR EKANERRDNE ADARHCSFCG YFDAPDIPDS
FQTIFDAGDD FLGSISGHEN IPHQWLRHDG DTLFRYLENA GDVSLAAETR GSSFAVKETV
YAGYVQAAIE KDFAPWFIDV HAGLRAEYTD VKVSGVDEQL SALVILDQTE LGQEFGASVS
IDESSNYTNV LPSVSFKASW LDSWVFRAAY NHSITRPTLE QMAPGVTYTT TRQGGDLRAR
IGNAQLLPFE AKNIDVAVEH YYQENSYISA GYFRKTVDNF IVNESSTQTF NNVTDPSTGT
NPNAADDADA LAQFSVISPS NGESATVEGV EIAVQHLFGD SGWGIQANAS FVDSNAELDT
ANIRSTFALT GLSGAKNMVL FYEKDALQWR VAWNQREGFL QSLNQTQSTE PTFVSPYEQW
DMSLSYQFSP KVAVFFEGIN ITNETVHKRG RFSNHLLLVQ DAGARYALGV NITY
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