| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03889 |
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| Symbol | |
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| ID | 6776985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 4188637 |
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| End bp | 4190022 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642757340 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002128173 |
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| Protein GI | 196158684 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTTG CGGTAGTGGT TATCGCAATC GTAACGCTTG TTCACTTCAG TATTTCAAAA
ATTGTTGCCG AGCAAAGTCG CGCGCAACAA CAGTCACTTT CGCCTGCAAT ATCACTGATT
GTAGAGCAAC TGCTAAAACC ATTACACATT TCAGAAGCGT TAGGTCATTC CACTGAACTC
GTAGACTTGC TAGACGGCGA AACCATAGAC CAGCAAGCGG TCTTCAAAAC CCTCGAACGT
CTGGAAAATG AGTTTGGTTT GTCGTTTTTC ATTGCCAGTG AAGCGGATAG AAAGCAATAC
AACTCCGACG GCAGCATCAT CAACTTAATA GAAGGTGAAG TTAGCTGGTA CTTCAAATAT
CGTGACTACC CCGCCGATGC TGTTGCAGAT ATAGGTAAGT GGGAAGACAC GCATTTCTAT
ATTGATATTA AAATTCACGA TGAAGACGGG CGATTCTTAG GCTTTTTTGG TGTAGGCAAA
AGCCTGCGCA GCTTCATCGA AATTTTTGAT ACTTACAAGC AAGAGTACGG ATACGACTTT
TTATTTGTCG ATGGTGAGGG AGATATCATG TTGTCCTCTG ATCCCAGCCT TATTGCTTCG
TATTCAGACT TTACCAATTT ATCTGAATTA CCTTGGTATG CCAGCCTTCC GTTAGCTATT
CAAAACGAAC AGGCACTGAA CAATAAGCTG GTTACTATCG ACCAGAAAGA TTTCCTCATC
GCCGAGGTGA AACTCAATCA ATTTGGGTGG ACAGTGTTTC TTTTAAGTCC CTTGGAAGAC
CGTCAGGCTG AAATTTCTCA AGCCTTTATT TTCAGTGTAG TCACATTATT AGTTGTTGTT
TTCTCGCTGT TCTTGCTCAT CTACAATTTA CTTTATTATT TTAGAAAAGA CATGCAGCCA
GACCTAGTAG TGCGCCACAG CAACCGACTG CCAGAGAAAG ACAATCTGCA GCTTATTTAT
AAAAGCTTGT TAGCTGAGCA TAAGTCATTA AGCGTGATGT TGATAAGCGT GGATGAGTTT
AGCGATATCG TTGATGCACA TGGGCGCAAT GCTGGTGATG ATATTTTAGA TAAAATTGTG
GCTTACTTGG CTGAACAGAT GCGAGAGCAG GACGTGTTAG GCAGGTGGAG CAGCGCGGAG
TTCATTATTC TTTTGCCACA CACGGGCCCT CACGTTGCTT TTGATATGGC ACACAACCTT
CGCCATGGCA TTGCCACCCT ACCACCTTTA CAAGAATTGC CAGATGTGGT GATTACCGCC
TCAATTGGTA TTTCATATAC GGCTTCGCCA AGAGCGATGC ATGAGGTGAC TGCCCATGCT
GAAGACGCGC TTTACCAAGC AAAGCGCGAC GGCAGCAACC TAGTTAGAAT GCAGTTAATC
GACTAG
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| Protein sequence | MLFAVVVIAI VTLVHFSISK IVAEQSRAQQ QSLSPAISLI VEQLLKPLHI SEALGHSTEL
VDLLDGETID QQAVFKTLER LENEFGLSFF IASEADRKQY NSDGSIINLI EGEVSWYFKY
RDYPADAVAD IGKWEDTHFY IDIKIHDEDG RFLGFFGVGK SLRSFIEIFD TYKQEYGYDF
LFVDGEGDIM LSSDPSLIAS YSDFTNLSEL PWYASLPLAI QNEQALNNKL VTIDQKDFLI
AEVKLNQFGW TVFLLSPLED RQAEISQAFI FSVVTLLVVV FSLFLLIYNL LYYFRKDMQP
DLVVRHSNRL PEKDNLQLIY KSLLAEHKSL SVMLISVDEF SDIVDAHGRN AGDDILDKIV
AYLAEQMREQ DVLGRWSSAE FIILLPHTGP HVAFDMAHNL RHGIATLPPL QELPDVVITA
SIGISYTASP RAMHEVTAHA EDALYQAKRD GSNLVRMQLI D
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