| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03885 |
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| Symbol | |
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| ID | 6776931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 4184769 |
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| End bp | 4185578 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642757336 |
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| Product | transcriptional regulator, DeoR family protein |
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| Protein accession | YP_002128169 |
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| Protein GI | 196158680 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.81593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAGTA GCAAACCAGT TGAGCAGCGC CGCCAGCAAA TTGTGGCGTG GGTGAAAAAG
CAAGGTCAAT CTCAAGTTGA AGATTTGGCC GTGCGTTTTG CTACCTCTGA AGTCACCATC
AGAAAAGACC TTGCAGCACT TTCACAGCAA GGCTTGCTCA TTCGTCAGTT TGGTGGCGCA
GTGCCCGTAC CAGCTACTGC CTCTCATTCT GGCACTGCTC AACTTAGTAT CAACGAAGCC
AATGTAAATC ACGCTATCAG CCCGGCAATA AATGCCATAG GAAAGTGCGC AGCAAGCTTG
ATTAAGCCGG GGAGCAAGTT AGTGATAGAT TGCGGCTCTA CTACTGCATC AGTTTTGCCC
CACCTAGCGC AAGTCGACGA TTTAGTGGTC ATGACCAACA CCCTGTCGAC GGCCAATTAT
CTTACCCAAA GTGAGAAAGA ACCCACCGTA TTAATGGTAG GTGGCACGTG GGATACGCAG
TCACAGTCAT TTCAGGGCGC CATGGCCGAA CAGCTGGTGA GCGCCTATAG TTTTGATATT
GCGTTCATTG GCGCAGCGGG TATAGACGTA AACCGAGGCA CCACTACTTT TAACGAGCTT
ATTGGCGTGA CGCGAGCTAT GGCAGCGGCG GCCGGTAAGG TTGTGGTATT AGCCAGTTCA
AAAAAACTAA CGCACAAAAT GCCGAATCTT GAACTGAGCT GGAAAAGCAT TTCTGTTTTG
ATCACTGATG AAGGCATTAG CGATGAAGAC AAACTTAATA TTGAAAATCA GGGCGTGACA
GTCATCGTTG CCGTGCCCGC TGGAGAGTAA
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| Protein sequence | MKSSKPVEQR RQQIVAWVKK QGQSQVEDLA VRFATSEVTI RKDLAALSQQ GLLIRQFGGA
VPVPATASHS GTAQLSINEA NVNHAISPAI NAIGKCAASL IKPGSKLVID CGSTTASVLP
HLAQVDDLVV MTNTLSTANY LTQSEKEPTV LMVGGTWDTQ SQSFQGAMAE QLVSAYSFDI
AFIGAAGIDV NRGTTTFNEL IGVTRAMAAA AGKVVVLASS KKLTHKMPNL ELSWKSISVL
ITDEGISDED KLNIENQGVT VIVAVPAGE
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